RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 TYW1Q9NV66 732 aaKnown RBP18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 KLK14Q9P0G3 267 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 KANSL3Q9P2N6 904 aa18.69■□□□□ 0.58
RABGGTA-203ENST00000543002 TGFB1I1O43294 461 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 FAM189A1O60320 539 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 KIF20AO95235 890 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 CLTAP09496 248 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 GARTP22102 1010 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 AFF1P51825 1210 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 YARSP54577 528 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 OSTNP61366 133 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 ERVK-21P61565 698 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 SNRPFP62306 86 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 CAMK4Q16566 473 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 ZNF658Q5TYW1 1059 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 TMEM192Q8IY95 271 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 GSTCDQ8NEC7 633 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 POMGNT1Q8WZA1 660 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 SAMD11Q96NU1 681 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 GTPBP4Q9BZE4 634 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 TTYH1Q9H313 450 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 CWH43Q9H720 699 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 TOPORSQ9NS56 1045 aaPredicted RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 TBC1D13Q9NVG8 400 aa18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 AGO2Q9UKV8 859 aaKnown RBP18.68■□□□□ 0.58
RABGGTA-203ENST00000543002 CHD9Q3L8U1 2897 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 ZNF697Q5TEC3 545 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 HS2ST1Q7LGA3 356 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 SPRED2Q7Z698 418 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 GUF1Q8N442 669 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 RPS6KC1Q96S38 1066 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 MIOSQ9NXC5 875 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 HCSTQ9UBK5 93 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 MAN1B1Q9UKM7 699 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 RWDD3Q9Y3V2 267 aa18.67■□□□□ 0.58
RABGGTA-203ENST00000543002 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 MBD3O95983 291 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 POMCP01189 267 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 SCNN1GP51170 649 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 RNASELQ05823 741 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 XKR4Q5GH76 650 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 ZBTB41Q5SVQ8 909 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 ARMCX5Q6P1M9 558 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 ALKAL1Q6UXT8 129 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 SNX27Q96L92 541 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 CBWD1Q9BRT8 395 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 C17orf80Q9BSJ5 609 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 NUP62CLQ9H1M0 184 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 KCTD10Q9H3F6 313 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 SEMA6BQ9H3T3 888 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 AGPAT3Q9NRZ7 376 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 KIAA1468Q9P260 1216 aa18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 CGNQ9P2M7 1197 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 CPSF3Q9UKF6 684 aaKnown RBP18.66■□□□□ 0.58
RABGGTA-203ENST00000543002 PTGESO14684 152 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 LDHAP00338 332 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 LAG3P18627 525 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 BMPR1AP36894 532 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 TNFSF9P41273 254 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 POU5F1Q01860 360 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 GRIK3Q13003 919 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 SLC10A6Q3KNW5 377 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 EPC2Q52LR7 807 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 COBLL1Q53SF7 1204 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 SPOUT1Q5T280 376 aaKnown RBP18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 GOLGA5Q8TBA6 731 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 CXCL16Q9H2A7 254 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 NRDE2Q9H7Z3 1164 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 PLEKHA5Q9HAU0 1116 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 AAASQ9NRG9 546 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 MAPK8IP1Q9UQF2 711 aa18.65■□□□□ 0.58
RABGGTA-203ENST00000543002 PDXKO00764 312 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 MEFVO15553 781 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 DDHD2O94830 711 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 CXCL8P10145 99 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 CTNNB1P35222 781 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 ACOT2P49753 483 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 MORC3Q14149 939 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 ENOX2Q16206 610 aaKnown RBP18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 CRELD2Q6UXH1 353 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 ZNF280BQ86YH2 543 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 C12orf56Q8IXR9 622 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 SMYD4Q8IYR2 804 aaPredicted RBP18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 COLGALT1Q8NBJ5 622 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 ARNTL2Q8WYA1 636 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 PLVAPQ9BX97 442 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 PCIF1Q9H4Z3 704 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 RPF1Q9H9Y2 349 aaKnown RBP18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 CERS4Q9HA82 394 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 CNTN3Q9P232 1028 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 MTUS1Q9ULD2 1270 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 PLAGL2Q9UPG8 496 aa18.64■□□□□ 0.57
RABGGTA-203ENST00000543002 TTC26A0AVF1 554 aa18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 C5orf67F2Z3F1 127 aa18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 CLIC2O15247 247 aa18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 EXTL3O43909 919 aa18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 B4GALT3O60512 393 aa18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 ZC3H11AO75152 810 aaKnown RBP eCLIP18.63■□□□□ 0.57
RABGGTA-203ENST00000543002 RB1P06400 928 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms