RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 EIF3CQ99613 913 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 NFKBIZQ9BYH8 718 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 RBAKQ9NYW8 714 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
SCG3-202ENST00000542355 CENPFP49454 3210 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 KIF2AO00139 706 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 PMM2O15305 246 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 ABL1P00519 1130 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 PNMA6AP0CW24 399 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 CYBAP13498 195 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 TNNI1P19237 187 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 PSEN2P49810 448 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 KIF11P52732 1056 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 WNT7BP56706 349 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 ETF1P62495 437 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 KLHL30Q0D2K2 578 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 PSMD6Q15008 389 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 SPA17Q15506 151 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 ATF7IP2Q5U623 682 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 LMBRD2Q68DH5 695 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 TSHZ1Q6ZSZ6 1077 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 SV2AQ7L0J3 742 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 IRF2BP2Q7Z5L9 587 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 FAM84AQ96KN4 292 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 CALR3Q96L12 384 aaKnown RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 SCLT1Q96NL6 688 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 IRX2Q9BZI1 471 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 FAM49AQ9H0Q0 323 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 TMEM8AQ9HCN3 771 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 UBE2TQ9NPD8 197 aaPredicted RBP11.94□□□□□ -0.5
SCG3-202ENST00000542355 DNAI1Q9UI46 699 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 TFR2Q9UP52 801 aa11.94□□□□□ -0.5
SCG3-202ENST00000542355 SSU72P8A0A1W2PR75 194 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 MYADML2A6NDP7 307 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 YY1P25490 414 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 GTF2H1P32780 548 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 TNFSF9P41273 254 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 JAM2P57087 298 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 GNG11P61952 73 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 HTRA3P83110 453 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 GFPT1Q06210 699 aaPredicted RBP11.93□□□□□ -0.5
SCG3-202ENST00000542355 DRAP1Q14919 205 aaPredicted RBP11.93□□□□□ -0.5
SCG3-202ENST00000542355 SKIV2LQ15477 1246 aaKnown RBP11.93□□□□□ -0.5
SCG3-202ENST00000542355 ARHGAP44Q17R89 818 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 ARHGAP29Q52LW3 1261 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 KIF18AQ8NI77 898 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 TAS1R2Q8TE23 839 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 ZNF516Q92618 1163 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 SEMA4DQ92854 862 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 STK33Q9BYT3 514 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 HAUS4Q9H6D7 363 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 PRMT7Q9NVM4 692 aaPredicted RBP11.93□□□□□ -0.5
SCG3-202ENST00000542355 MYO6Q9UM54 1294 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 GINS2Q9Y248 185 aa11.93□□□□□ -0.5
SCG3-202ENST00000542355 HAS3O00219 553 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ABLIM1O14639 778 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ZNF263O14978 683 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ZEB2O60315 1214 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 GFPT2O94808 682 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 PGK1P00558 417 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 TUBB4AP04350 444 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ELNP15502 786 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 STAT1P42224 750 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 VEGFBP49765 207 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 GPC3P51654 580 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 PURAQ00577 322 aaKnown RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 ENPEPQ07075 957 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 MCL1Q07820 350 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 CACNB2Q08289 660 aaPredicted RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 TMEM62Q0P6H9 643 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 HIC1Q14526 733 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 KIZQ2M2Z5 673 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ASTE1Q2TB18 679 aaPredicted RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 GNASQ5JWF2 1037 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 MPZL3Q6UWV2 235 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCG3-202ENST00000542355 PTPRHQ9HD43 1115 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 RAB20Q9NX57 234 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 F8VZ95 297 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 OGTO15294 1046 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 FAM189A1O60320 539 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 PROZP22891 400 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ARHGAP25P42331 645 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 CLDN10P78369 228 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ZNF200P98182 395 aaPredicted RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 HSP90AA2PQ14568 343 aaPredicted RBP11.92□□□□□ -0.5
SCG3-202ENST00000542355 ZNF568Q3ZCX4 644 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 EEF1DP3Q658K8 133 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ARHGEF19Q8IW93 802 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 THNSL1Q8IYQ7 743 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 FBXL13Q8NEE6 735 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 CD99L2Q8TCZ2 262 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 ELMO3Q96BJ8 720 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 KATNAL1Q9BW62 490 aa11.92□□□□□ -0.5
SCG3-202ENST00000542355 TRIM10Q9UDY6 481 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms