RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 ADSSP30520 456 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 CAMK4Q16566 473 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 BMT2Q1RMZ1 405 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 SPOUT1Q5T280 376 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 ZNF697Q5TEC3 545 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 SPATA20Q8TB22 786 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 URGCPQ8TCY9 931 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 POMGNT1Q8WZA1 660 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 MSTO1Q9BUK6 570 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 CCDC94Q9BW85 323 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 TBC1D13Q9NVG8 400 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 MTUS1Q9ULD2 1270 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
TSPAN9-207ENST00000539631 TRIOBPQ9H2D6 2365 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 TMEM265A0A087WTH1 108 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 OGTO15294 1046 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 INPPL1O15357 1258 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 TGFB1I1O43294 461 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 FAM189A1O60320 539 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 MCM4P33991 863 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 TNFSF9P41273 254 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 SCNN1GP51170 649 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 ERVK-21P61565 698 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 ZBTB41Q5SVQ8 909 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 ISM2Q6H9L7 571 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 Q7L0L9 218 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 LRRC43Q8N309 656 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 GSTCDQ8NEC7 633 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 CLP1Q92989 425 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 FAM161BQ96MY7 647 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 SEMA6BQ9H3T3 888 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 NRDE2Q9H7Z3 1164 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 RMND1Q9NWS8 449 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 MAN1B1Q9UKM7 699 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 AGO2Q9UKV8 859 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 MAPK8IP1Q9UQF2 711 aa13.88□□□□□ -0.19
TSPAN9-207ENST00000539631 CLIC2O15247 247 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 MEFVO15553 781 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 B4GALT3O60512 393 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 DDHD2O94830 711 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 GARTP22102 1010 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 CTNNB1P35222 781 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 YARSP54577 528 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 KNOP1Q1ED39 458 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 ZNF658Q5TYW1 1059 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 GPR153Q6NV75 609 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 ARMCX5Q6P1M9 558 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 SMYD4Q8IYR2 804 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 ZSWIM2Q8NEG5 633 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 ARNTL2Q8WYA1 636 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 RSPH1Q8WYR4 309 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 RPS6KC1Q96S38 1066 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 CBWD1Q9BRT8 395 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 GBP3Q9H0R5 595 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 CLSTN2Q9H4D0 955 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 PCIF1Q9H4Z3 704 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 KANSL3Q9P2N6 904 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 PLAGL2Q9UPG8 496 aa13.87□□□□□ -0.19
TSPAN9-207ENST00000539631 LAMA3Q16787 3333 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 GOLGA8IPA6NC78 632 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 EPOPA6NHQ4 379 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 GOLGA8JA6NMD2 632 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 RFXAPO00287 272 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 PTGESO14684 152 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 CLTAP09496 248 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 CXCL8P10145 99 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 BMPR1AP36894 532 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 PBX3P40426 434 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 ACOT2P49753 483 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 GRIN2CQ14957 1233 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 SLC10A6Q3KNW5 377 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 EPC2Q52LR7 807 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 XKR4Q5GH76 650 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 GLRA4Q5JXX5 417 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 CRELD2Q6UXH1 353 aaPredicted RBP13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 ALKAL1Q6UXT8 129 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 COLGALT1Q8NBJ5 622 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 SNX27Q96L92 541 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 SAMD11Q96NU1 681 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 KCTD10Q9H3F6 313 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 AGPAT3Q9NRZ7 376 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 CPSF3Q9UKF6 684 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 ATG2AQ2TAZ0 1938 aa13.86□□□□□ -0.19
TSPAN9-207ENST00000539631 NT5C1B-RDH14C9J2C7 533 aa13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 BIN1O00499 593 aa13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 ZC3H11AO75152 810 aaKnown RBP eCLIP13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 LAG3P18627 525 aa13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 PRCPP42785 496 aa13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 BCAR1P56945 870 aa13.85□□□□□ -0.19
TSPAN9-207ENST00000539631 GRIK3Q13003 919 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms