RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 IL12RB1P42701 662 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 HHEXQ03014 270 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
TRAV11-201ENST00000539512 GRM7Q14831 915 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 MFSD5Q6N075 450 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 FAM111BQ6SJ93 734 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 ADGRE4PQ86SQ3 457 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 CIR1Q86X95 450 aaPredicted RBP8.43□□□□□ -1.06
TRAV11-201ENST00000539512 C3orf20Q8ND61 904 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 STON2Q8WXE9 905 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 MTFMTQ96DP5 389 aaKnown RBP8.43□□□□□ -1.06
TRAV11-201ENST00000539512 DUSP10Q9Y6W6 482 aa8.43□□□□□ -1.06
TRAV11-201ENST00000539512 MATN2O00339 956 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 SLC6A9P48067 706 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 TBX4P57082 545 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 ADAM8P78325 824 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 SP140Q13342 867 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 FKBP15Q5T1M5 1219 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 ERICH6BQ5W0A0 696 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 DGKHQ86XP1 1220 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 GPR135Q8IZ08 494 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 ZBTB34Q8NCN2 500 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 CASKIN2Q8WXE0 1202 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 CDK5RAP3Q96JB5 506 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 GNRHR2Q96P88 292 aa8.42□□□□□ -1.06
TRAV11-201ENST00000539512 FRMPD2Q68DX3 1309 aaPredicted RBP8.42□□□□□ -1.06
TRAV11-201ENST00000539512 H3BML4 177 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 FLT3LGP49771 235 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 MRPL49Q13405 166 aaKnown RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 ZNF572Q7Z3I7 529 aaPredicted RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 DAAM2Q86T65 1068 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 LILRA3Q8N6C8 439 aaPredicted RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 TEPSINQ96N21 525 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 ACO2Q99798 780 aaKnown RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 PTPN18Q99952 460 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 MEGF9Q9H1U4 602 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 ADAM7Q9H2U9 754 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 CALCOCO1Q9P1Z2 691 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 RUVBL1Q9Y265 456 aaKnown RBP8.41□□□□□ -1.06
TRAV11-201ENST00000539512 SIK3Q9Y2K2 1263 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 STXBP5LQ9Y2K9 1186 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 PCDHB1Q9Y5F3 818 aa8.41□□□□□ -1.06
TRAV11-201ENST00000539512 B5MCH6 92 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 IPO13O94829 963 aaKnown RBP8.4□□□□□ -1.06
TRAV11-201ENST00000539512 MYBP10242 640 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 TARDBPQ13148 414 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRAV11-201ENST00000539512 TBC1D10BQ4KMP7 808 aaPredicted RBP8.4□□□□□ -1.06
TRAV11-201ENST00000539512 FAM47AQ5JRC9 791 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 B3GNT9Q6UX72 402 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 ZNF512Q96ME7 567 aaPredicted RBP8.4□□□□□ -1.06
TRAV11-201ENST00000539512 XYLT2Q9H1B5 865 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 PLA2G3Q9NZ20 509 aa8.4□□□□□ -1.06
TRAV11-201ENST00000539512 FEZ2Q9UHY8 353 aaPredicted RBP8.4□□□□□ -1.06
TRAV11-201ENST00000539512 PRR5-ARHGAP8B1AHC4 643 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 HOXA3O43365 443 aaPredicted RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 PLIN1O60240 522 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 SNRPA1P09661 255 aaKnown RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 ATP5JP18859 108 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 HTR1BP28222 390 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 GNALP38405 381 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 FXR1P51114 621 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 KHDC1Q4VXA5 237 aaKnown RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 ZFYVE27Q5T4F4 411 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 AFMIDQ63HM1 303 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 D2HGDHQ8N465 521 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 FAM167AQ96KS9 214 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 MPHOSPH9Q99550 1183 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 CGRRF1Q99675 332 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 CPPED1Q9BRF8 314 aaPredicted RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 AGO3Q9H9G7 860 aaKnown RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 LMBRD1Q9NUN5 540 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 PPP4R1LQ9P1A2 415 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 ZFR2Q9UPR6 939 aaKnown RBP8.39□□□□□ -1.07
TRAV11-201ENST00000539512 ACTL7AQ9Y615 435 aa8.39□□□□□ -1.07
TRAV11-201ENST00000539512 ZMYM3Q14202 1370 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 FAM227AF5H4B4 570 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 H3BUI4 141 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 MFAP3LO75121 409 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 RAD17O75943 681 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 UBXN7O94888 489 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 INHBBP09529 407 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 MSX2P35548 267 aaPredicted RBP8.38□□□□□ -1.07
TRAV11-201ENST00000539512 MAP2K6P52564 334 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 DSC2Q02487 901 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 NOGQ13253 232 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 GBX1Q14549 363 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 GRM3Q14832 879 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 FAM214AQ32MH5 1076 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 HS1BP3Q53T59 392 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
TRAV11-201ENST00000539512 KSR2Q6VAB6 950 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 FAM83AQ86UY5 434 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 CCDC146Q8IYE0 955 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 TTC17Q96AE7 1141 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 VRK1Q99986 396 aaPredicted RBP8.38□□□□□ -1.07
TRAV11-201ENST00000539512 CNNM1Q9NRU3 951 aa8.38□□□□□ -1.07
TRAV11-201ENST00000539512 GNL3LQ9NVN8 582 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms