RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 GBP7Q8N8V2 638 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 ARHGEF2Q92974 986 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 ZNF653Q96CK0 615 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 RIT2Q99578 217 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 DDX23Q9BUQ8 820 aaKnown RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 HSPBP1Q9NZL4 362 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 BAIAP2L1Q9UHR4 511 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 BCS1LQ9Y276 419 aa17.81■□□□□ 0.44
CTSB-228ENST00000533455 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
CTSB-228ENST00000533455 TMEM120BA0PK00 339 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 TISP43B9A030 160 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 O00370 1275 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 ALADP13716 330 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 KRT17Q04695 432 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 LONRF1Q17RB8 773 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 CCDC25Q86WR0 208 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 KIAA0825Q8IV33 1275 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 BTBD6Q96KE9 485 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 GJD4Q96KN9 370 aaPredicted RBP17.8■□□□□ 0.44
CTSB-228ENST00000533455 PLVAPQ9BX97 442 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 EBF2Q9HAK2 575 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 DONSONQ9NYP3 566 aa17.8■□□□□ 0.44
CTSB-228ENST00000533455 CYP26A1O43174 497 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 KIF1CO43896 1103 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 TCEA3O75764 348 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 SUN1O94901 812 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 NQO1P15559 274 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 MAN1A1P33908 653 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 MFAP3P55082 362 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 UBXN2AP68543 259 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 PTK6Q13882 451 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 SLC47A2Q86VL8 602 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 DYDC1Q8WWB3 177 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 CKAP2Q8WWK9 683 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 PLCD4Q9BRC7 762 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 RANBP17Q9H2T7 1088 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 ST6GALNAC4Q9H4F1 302 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 IPO5O00410 1097 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 GJB6O95452 261 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 DLATP10515 647 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 PLS3P13797 630 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 NPR1P16066 1061 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 CDR2Q01850 454 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 SGO2Q562F6 1265 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 TBC1D1Q86TI0 1168 aaPredicted RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 MAIP1Q8WWC4 291 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 TCP11Q8WWU5 503 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 SNF8Q96H20 258 aa17.79■□□□□ 0.44
CTSB-228ENST00000533455 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
CTSB-228ENST00000533455 TCP11X1B4DZS4 312 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 CLDN3O15551 220 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 ENTPD3O75355 529 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 TTC4O95801 387 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 CYP11B1P15538 503 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 IVDP26440 423 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 CHKAP35790 457 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 GTF2BQ00403 316 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 CAV1Q03135 178 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 BNIP1Q12981 228 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 MKRN3Q13064 507 aaKnown RBP17.78■□□□□ 0.44
CTSB-228ENST00000533455 DACT2Q5SW24 774 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 STRIP1Q5VSL9 837 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 SPICE1Q8N0Z3 855 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 POP1Q99575 1024 aaKnown RBP17.78■□□□□ 0.44
CTSB-228ENST00000533455 FGFR1OP2Q9NVK5 253 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 CD2APQ9Y5K6 639 aa17.78■□□□□ 0.44
CTSB-228ENST00000533455 ACSL3O95573 720 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 ADRB2P07550 413 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 CLTAP09496 248 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.44
CTSB-228ENST00000533455 LRRC14Q15048 493 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 ACAD10Q6JQN1 1059 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 PPM1KQ8N3J5 372 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 MXRA8Q9BRK3 442 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 ECT2Q9H8V3 914 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 DBNDD1Q9H9R9 158 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 LGALS13Q9UHV8 139 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 SERPINA10Q9UK55 444 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 ARL2BPQ9Y2Y0 163 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 COQ4Q9Y3A0 265 aa17.77■□□□□ 0.44
CTSB-228ENST00000533455 SF3A3Q12874 501 aaKnown RBP eCLIP17.77■□□□□ 0.432e-6■■■■■ 32.1
CTSB-228ENST00000533455 CCDC174Q6PII3 467 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 MIER3Q7Z3K6 550 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 SPATA21Q7Z572 469 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 PNMA8AQ86V59 439 aaPredicted RBP17.77■□□□□ 0.43
CTSB-228ENST00000533455 ZSWIM2Q8NEG5 633 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 GRK7Q8WTQ7 553 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 C1orf54Q8WWF1 131 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.43
CTSB-228ENST00000533455 ARHGEF10LQ9HCE6 1279 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 PRKAG3Q9UGI9 489 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 ASIC3Q9UHC3 531 aa17.77■□□□□ 0.43
CTSB-228ENST00000533455 A0A1B0GUA9 196 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 SORBS3O60504 671 aa17.76■□□□□ 0.43
CTSB-228ENST00000533455 P4HBP07237 508 aaKnown RBP17.76■□□□□ 0.43
CTSB-228ENST00000533455 CREB1P16220 341 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms