RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ASPSCR1Q9BZE9 553 aa8.81□□□□□ -1
SDCBP-208ENST00000520228 HAPLN2Q9GZV7 340 aa8.81□□□□□ -1
SDCBP-208ENST00000520228 KATNBL1Q9H079 304 aa8.81□□□□□ -1
SDCBP-208ENST00000520228 WNT8AQ9H1J5 351 aa8.81□□□□□ -1
SDCBP-208ENST00000520228 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 BTAF1O14981 1849 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 APOL3O95236 402 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 PFKMP08237 780 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 POLD1P28340 1107 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 SLURP1P55000 103 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 DCTN1Q14203 1278 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 EIF4HQ15056 248 aaKnown RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 FSCN1Q16658 493 aaKnown RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 SYDE2Q5VT97 1194 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 GRAMD4Q6IC98 578 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 COL23A1Q86Y22 540 aaPredicted RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 TTC5Q8N0Z6 440 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 WDR48Q8TAF3 677 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 RPGRQ92834 1020 aaKnown RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 MBD6Q96DN6 1003 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 ACAP3Q96P50 834 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 ANO3Q9BYT9 981 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 CCDC8Q9H0W5 538 aaPredicted RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 KCMF1Q9P0J7 381 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 FTSJ1Q9UET6 329 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 NUMBLQ9Y6R0 609 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 CEMIPQ8WUJ3 1361 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 RREB1Q92766 1687 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 RGPD3A6NKT7 1758 aaPredicted RBP8.8□□□□□ -1
SDCBP-208ENST00000520228 RGPD4Q7Z3J3 1758 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 MYPNQ86TC9 1320 aa8.8□□□□□ -1
SDCBP-208ENST00000520228 A0A0A6YYJ9 748 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 A0A0G2JNJ9 132 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 C9orf118A6NHY6 69 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 BTBD11A6QL63 1104 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 CUTAO60888 179 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 OPHN1O60890 802 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 PDGFRBP09619 1106 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 ADCY8P40145 1251 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 GPR3P46089 330 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 RIPK4P57078 832 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
SDCBP-208ENST00000520228 KLF1Q13351 362 aaPredicted RBP8.79□□□□□ -1
SDCBP-208ENST00000520228 MCTP2Q6DN12 878 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 ZNF790Q6PG37 636 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 Q6ZUG5 572 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 BMP8AQ7Z5Y6 402 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 FERMT3Q86UX7 667 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 SLC41A1Q8IVJ1 513 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 CCDC146Q8IYE0 955 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 RUNDC1Q96C34 613 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 AJUBAQ96IF1 538 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 MTG2Q9H4K7 406 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 Q9UFV3 132 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 TRHDEQ9UKU6 1024 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 NUP188Q5SRE5 1749 aa8.79□□□□□ -1
SDCBP-208ENST00000520228 TOGARAM1Q9Y4F4 1720 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 GOLGA8BA8MQT2 603 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 GABRDO14764 452 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 ETV4P43268 484 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 SCAND1P57086 179 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 ANTXR2P58335 489 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 ITKQ08881 620 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 TAF7Q15545 349 aaPredicted RBP8.78□□□□□ -1
SDCBP-208ENST00000520228 CCDC184Q52MB2 194 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 PITRM1Q5JRX3 1037 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 SMIM5Q71RC9 77 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 REXO1L1PQ8IX06 675 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 DNAJC10Q8IXB1 793 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 OR5AN1Q8NGI8 311 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 FERMT2Q96AC1 680 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 TMEM168Q9H0V1 697 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 PRDM12Q9H4Q4 367 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 KCNG1Q9UIX4 513 aa8.78□□□□□ -1
SDCBP-208ENST00000520228 STARD3NLO95772 234 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 CLEC2LP0C7M8 214 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 ENPP1P22413 925 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 TMPOP42166 694 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 CRKLP46109 303 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 LMOD3Q0VAK6 560 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 CT83Q5H943 113 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 TRIM68Q6AZZ1 485 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 KLHL36Q8N4N3 616 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 PNISRQ8TF01 805 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 MTMR8Q96EF0 704 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 THUMPD2Q9BTF0 503 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 LUC7LQ9NQ29 371 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 ADAM29Q9UKF5 820 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 RRP7AQ9Y3A4 280 aaKnown RBP8.77□□□□□ -1.01
SDCBP-208ENST00000520228 MRC1P22897 1456 aa8.77□□□□□ -1.01
SDCBP-208ENST00000520228 PAPPAQ13219 1627 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 ADAMTS20P59510 1910 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 KCNQ3O43525 872 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 RPS6KA4O75676 772 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 CYP19A1P11511 503 aaPredicted RBP8.76□□□□□ -1.01
SDCBP-208ENST00000520228 MAP3K12Q12852 859 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 TRIM25Q14258 630 aaKnown RBP8.76□□□□□ -1.01
SDCBP-208ENST00000520228 DGKDQ16760 1214 aa8.76□□□□□ -1.01
SDCBP-208ENST00000520228 CCDC62Q6P9F0 684 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms