RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 SNTG2Q9NY99 539 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 GDAQ9Y2T3 454 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 STYXL1Q9Y6J8 313 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 CHD9Q3L8U1 2897 aa14.05□□□□□ -0.16
COL6A6-203ENST00000511332 A0A0B4J269 797 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 PPM1AP35813 382 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 SNRPFP62306 86 aaKnown RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 KCNA1Q09470 495 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 GRIK3Q13003 919 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 HSP90AA2PQ14568 343 aaPredicted RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 HS2ST1Q7LGA3 356 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 TMEM192Q8IY95 271 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 THNSL1Q8IYQ7 743 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 DEFB123Q8N688 67 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 KIAA0895Q8NCT3 520 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 GLIS3Q8NEA6 775 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 ZNF507Q8TCN5 953 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 SCFD1Q8WVM8 642 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 ARNTL2Q8WYA1 636 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 POMGNT1Q8WZA1 660 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 ZFP42Q96MM3 310 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 ACAP3Q96P50 834 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 FAM193BQ96PV7 902 aaPredicted RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 GAD1Q99259 594 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 C17orf80Q9BSJ5 609 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 C11orf84Q9BUA3 381 aaPredicted RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 GBP3Q9H0R5 595 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 LMBRD1Q9NUN5 540 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 TYW1Q9NV66 732 aaKnown RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 CGNQ9P2M7 1197 aaKnown RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
COL6A6-203ENST00000511332 MTUS1Q9ULD2 1270 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
COL6A6-203ENST00000511332 MYO9BQ13459 2157 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 ANKRD63C9JTQ0 380 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 C5orf67F2Z3F1 127 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 KIAA0391O15091 583 aaKnown RBP14.03□□□□□ -0.16
COL6A6-203ENST00000511332 ZC3H11AO75152 810 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A6-203ENST00000511332 POMCP01189 267 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 RB1P06400 928 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 CLTAP09496 248 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 LINC00271P0C7V0 271 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 GARTP22102 1010 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 BMPR1AP36894 532 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 SCNN1GP51170 649 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 OSTNP61366 133 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 STK4Q13043 487 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 EPC2Q52LR7 807 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 ARMCX5Q6P1M9 558 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 CEP120Q8N960 986 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 COLGALT1Q8NBJ5 622 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 SPATA20Q8TB22 786 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 GOLGA5Q8TBA6 731 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 P2RX5Q93086 422 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 SNX27Q96L92 541 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 ZNF558Q96NG5 402 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 HAPLN2Q9GZV7 340 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 SEMA6BQ9H3T3 888 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 CWH43Q9H720 699 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
COL6A6-203ENST00000511332 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.03□□□□□ -0.16
COL6A6-203ENST00000511332 TISP43B9A030 160 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 FAM189A1O60320 539 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 LDHAP00338 332 aaKnown RBP14.02□□□□□ -0.17
COL6A6-203ENST00000511332 PPP2R3AQ06190 1150 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 KNOP1Q1ED39 458 aaKnown RBP14.02□□□□□ -0.17
COL6A6-203ENST00000511332 LRRC55Q6ZSA7 311 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 Q7L0L9 218 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 SPRED2Q7Z698 418 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 NELFCDQ8IXH7 590 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 FAM161BQ96MY7 647 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 TMEM175Q9BSA9 504 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 CERS4Q9HA82 394 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 PLEKHA5Q9HAU0 1116 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 CNTN3Q9P232 1028 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 HCSTQ9UBK5 93 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 PCDHA5Q9Y5H7 936 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 CHD7Q9P2D1 2997 aa14.02□□□□□ -0.17
COL6A6-203ENST00000511332 PTGESO14684 152 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 MBD3O95983 291 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 THP07101 528 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 CXCL8P10145 99 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 ADSSP30520 456 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 HOXD13P35453 343 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 ALDH7A1P49419 539 aaKnown RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 POU5F1Q01860 360 aaKnown RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 GRIN2CQ14957 1233 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 ZNF658Q5TYW1 1059 aaPredicted RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 KCNT2Q6UVM3 1135 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 CD302Q8IX05 232 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 GUF1Q8N442 669 aaKnown RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 GSTCDQ8NEC7 633 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 GDPD5Q8WTR4 605 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 GAS2L1Q99501 681 aaPredicted RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 IKZF4Q9H2S9 585 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 CLSTN2Q9H4D0 955 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 PRDM12Q9H4Q4 367 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 NRDE2Q9H7Z3 1164 aa14.01□□□□□ -0.17
COL6A6-203ENST00000511332 RPF1Q9H9Y2 349 aaKnown RBP14.01□□□□□ -0.17
COL6A6-203ENST00000511332 AGPAT3Q9NRZ7 376 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms