RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 RPL10LQ96L21 214 aaKnown RBP5.82□□□□□ -1.48
SMC4-224ENST00000494612 FDXACB1Q9BRP7 624 aaPredicted RBP5.82□□□□□ -1.48
SMC4-224ENST00000494612 SOX7Q9BT81 388 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 ACE2Q9BYF1 805 aaPredicted RBP5.82□□□□□ -1.48
SMC4-224ENST00000494612 WNT8AQ9H1J5 351 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 DMRT3Q9NQL9 472 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 TUBD1Q9UJT1 453 aa5.82□□□□□ -1.48
SMC4-224ENST00000494612 TMEM191CA6NGB0 347 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 MAFGO15525 162 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 ZRANB2O95218 330 aaKnown RBP eCLIP5.81□□□□□ -1.48
SMC4-224ENST00000494612 MTHFD2P13995 350 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 GSPT1P15170 499 aaKnown RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 MAN2A2P49641 1150 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 RABGGTBP53611 331 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 SLC5A3P53794 718 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 MRPS21P82921 87 aaKnown RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 CNGB1Q14028 1251 aaPredicted RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 UAP1L1Q3KQV9 507 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 LMBR1LQ6UX01 489 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 HTR3DQ70Z44 454 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 BMP8AQ7Z5Y6 402 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 CMTR2Q8IYT2 770 aaKnown RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 MYO1HQ8N1T3 1032 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 ANKRD53Q8N9V6 530 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 DPF2Q92785 391 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 WDR92Q96MX6 357 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 ZNF277Q9NRM2 450 aaPredicted RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 POLR3BQ9NW08 1133 aaPredicted RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 ANKRD6Q9Y2G4 727 aa5.81□□□□□ -1.48
SMC4-224ENST00000494612 RBM8AQ9Y5S9 174 aaKnown RBP5.81□□□□□ -1.48
SMC4-224ENST00000494612 E2F8A0AVK6 867 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 UBE2QL1A1L167 161 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 ATF3P18847 181 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 FBLP22087 321 aaKnown RBP5.8□□□□□ -1.48
SMC4-224ENST00000494612 BPIFB4P59827 614 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 MLC1Q15049 377 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 GAGE13Q4V321 117 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 MBNL2Q5VZF2 373 aaKnown RBP5.8□□□□□ -1.48
SMC4-224ENST00000494612 LAIR1Q6GTX8 287 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 NOL8Q76FK4 1167 aaKnown RBP5.8□□□□□ -1.48
SMC4-224ENST00000494612 MRGPREQ86SM8 312 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 CLEC14AQ86T13 490 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 GSPT2Q8IYD1 628 aaKnown RBP5.8□□□□□ -1.48
SMC4-224ENST00000494612 NRG4Q8WWG1 115 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 GCDHQ92947 438 aaPredicted RBP5.8□□□□□ -1.48
SMC4-224ENST00000494612 SERPINB13Q9UIV8 391 aa5.8□□□□□ -1.48
SMC4-224ENST00000494612 KLRG2A4D1S0 409 aaPredicted RBP5.79□□□□□ -1.48
SMC4-224ENST00000494612 MYBP10242 640 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 ADSLP30566 484 aaPredicted RBP5.79□□□□□ -1.48
SMC4-224ENST00000494612 NRG3P56975 720 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 NOMO1Q15155 1222 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 ELAVL1Q15717 326 aaKnown RBP5.79□□□□□ -1.48
SMC4-224ENST00000494612 RHOUQ7L0Q8 258 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 CATIPQ7Z7H3 387 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 MIER2Q8N344 545 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 GLB1L3Q8NCI6 653 aaPredicted RBP5.79□□□□□ -1.48
SMC4-224ENST00000494612 FATE1Q969F0 183 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 TRPS1Q9UHF7 1281 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 INTUQ9ULD6 942 aa5.79□□□□□ -1.48
SMC4-224ENST00000494612 DAPK3O43293 454 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 PRAMEF4O60810 478 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 LY86O95711 162 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 PROZP22891 400 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 FSTL1Q12841 308 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 ADRM1Q16186 407 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 HSP90AB2PQ58FF8 381 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 MUM1L1Q5H9M0 696 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 C1QL3Q5VWW1 255 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 ABHD15Q6UXT9 468 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 GLB1L2Q8IW92 636 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 PLA2G15Q8NCC3 412 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.78□□□□□ -1.48
SMC4-224ENST00000494612 PIK3C3Q8NEB9 887 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 RSAD2Q8WXG1 361 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 RIN2Q8WYP3 895 aaPredicted RBP5.78□□□□□ -1.48
SMC4-224ENST00000494612 UIMC1Q96RL1 719 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 TCF25Q9BQ70 676 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 ADI1Q9BV57 179 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 GPR87Q9BY21 358 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 HAPLN2Q9GZV7 340 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 IL23AQ9NPF7 189 aa5.78□□□□□ -1.48
SMC4-224ENST00000494612 GRXCR1A8MXD5 290 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 AP1G1O43747 822 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 AKR1B10O60218 316 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 NRP2O60462 931 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 RPS6KA4O75676 772 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 VSIG10L2P0DP72 767 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 GAAP10253 952 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 ADRA1BP35368 520 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 GPR15P49685 360 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 FXR1P51114 621 aaKnown RBP eCLIP5.77□□□□□ -1.49
SMC4-224ENST00000494612 ZNF267Q14586 743 aaPredicted RBP5.77□□□□□ -1.49
SMC4-224ENST00000494612 UBE3CQ15386 1083 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 RABL3Q5HYI8 236 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 TMEM240Q5SV17 173 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 IFIT1BQ5T764 474 aaKnown RBP5.77□□□□□ -1.49
SMC4-224ENST00000494612 FAM102BQ5T8I3 360 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 BTNL9Q6UXG8 535 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 HAS1Q92839 578 aa5.77□□□□□ -1.49
SMC4-224ENST00000494612 RAB24Q969Q5 203 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms