RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SLC39A4Q6P5W5 647 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 LRRC55Q6ZSA7 311 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 SPRED2Q7Z698 418 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-209ENST00000494255 COLGALT1Q8NBJ5 622 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 GLIS3Q8NEA6 775 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 ZFP42Q96MM3 310 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 ZNF558Q96NG5 402 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 GAS2L1Q99501 681 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-209ENST00000494255 C11orf84Q9BUA3 381 aaPredicted RBP13.63□□□□□ -0.23
TRA2A-209ENST00000494255 PLVAPQ9BX97 442 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 GBP3Q9H0R5 595 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 PRDM12Q9H4Q4 367 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 CWH43Q9H720 699 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 RMND1Q9NWS8 449 aa13.63□□□□□ -0.23
TRA2A-209ENST00000494255 ANKRD63C9JTQ0 380 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 OGTO15294 1046 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 ZC3H11AO75152 810 aaKnown RBP eCLIP13.62□□□□□ -0.238e-9■□□□□ 8.4
TRA2A-209ENST00000494255 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 KIF20AO95235 890 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 POMCP01189 267 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 CLTAP09496 248 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 SCNN1GP51170 649 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 KCNB1Q14721 858 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 EPM2AIP1Q7L775 607 aaPredicted RBP13.62□□□□□ -0.23
TRA2A-209ENST00000494255 CEP120Q8N960 986 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 ZNF507Q8TCN5 953 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 POMGNT1Q8WZA1 660 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 SMARCE1Q969G3 411 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 HCSTQ9UBK5 93 aa13.62□□□□□ -0.23
TRA2A-209ENST00000494255 TDRD15B5MCY1 1934 aaKnown RBP13.62□□□□□ -0.23
TRA2A-209ENST00000494255 C5orf67F2Z3F1 127 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 LINC00271P0C7V0 271 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 PPM1AP35813 382 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 ALDH7A1P49419 539 aaKnown RBP13.61□□□□□ -0.23
TRA2A-209ENST00000494255 AFF1P51825 1210 aaKnown RBP13.61□□□□□ -0.23
TRA2A-209ENST00000494255 GRIK3Q13003 919 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 GPM6BQ13491 265 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 NELFCDQ8IXH7 590 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 GDPD5Q8WTR4 605 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 SCFD1Q8WVM8 642 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 P2RX5Q93086 422 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 GSDMAQ96QA5 445 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 HAPLN2Q9GZV7 340 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
TRA2A-209ENST00000494255 STYXL1Q9Y6J8 313 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 CITO14578 2027 aa13.61□□□□□ -0.23
TRA2A-209ENST00000494255 EPOPA6NHQ4 379 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 TISP43B9A030 160 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 THP07101 528 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 GARTP22102 1010 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 BCAR1P56945 870 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 STK4Q13043 487 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 BMT2Q1RMZ1 405 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 SEZ6Q53EL9 994 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 CDX2Q99626 313 aaPredicted RBP13.6□□□□□ -0.23
TRA2A-209ENST00000494255 GTPBP4Q9BZE4 634 aaKnown RBP13.6□□□□□ -0.23
TRA2A-209ENST00000494255 IKZF4Q9H2S9 585 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 RPF1Q9H9Y2 349 aaKnown RBP13.6□□□□□ -0.23
TRA2A-209ENST00000494255 LMBRD1Q9NUN5 540 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 MIOSQ9NXC5 875 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 SPG21Q9NZD8 308 aa13.6□□□□□ -0.23
TRA2A-209ENST00000494255 H3BNC9 293 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 KIAA0391O15091 583 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 SNRPFP62306 86 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 KNOP1Q1ED39 458 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 KIAA0895Q8NCT3 520 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 SNX27Q96L92 541 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 TMEM175Q9BSA9 504 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 PLEKHA5Q9HAU0 1116 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 CGNQ9P2M7 1197 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 PCDHA5Q9Y5H7 936 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 COL4A4P53420 1690 aaPredicted RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 MYO9BQ13459 2157 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 RFXAPO00287 272 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 PTGESO14684 152 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 DDHD2O94830 711 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 LDHAP00338 332 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 ALDH2P05091 517 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 CXCL8P10145 99 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 ADSSP30520 456 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 HOXD13P35453 343 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 TNFSF9P41273 254 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 ACOT2P49753 483 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 KRT17Q04695 432 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 PPP2R3AQ06190 1150 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 NOC3LQ8WTT2 800 aaKnown RBP13.59□□□□□ -0.23
TRA2A-209ENST00000494255 MYLIPQ8WY64 445 aa13.59□□□□□ -0.23
TRA2A-209ENST00000494255 ERCC4Q92889 916 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms