RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 MSTO1Q9BUK6 570 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 CCDC94Q9BW85 323 aaPredicted RBP18.42■□□□□ 0.54
RER1-208ENST00000493207 MRPL9Q9BYD2 267 aaKnown RBP18.42■□□□□ 0.54
RER1-208ENST00000493207 CWH43Q9H720 699 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 PCDHA5Q9Y5H7 936 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 TRIP11Q15643 1979 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 UBE4BO95155 1302 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 CITO14578 2027 aa18.42■□□□□ 0.54
RER1-208ENST00000493207 A0A0B4J269 797 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 POMCP01189 267 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 LINC00271P0C7V0 271 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 SCNN1GP51170 649 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 RNASELQ05823 741 aaKnown RBP18.41■□□□□ 0.54
RER1-208ENST00000493207 CAMK4Q16566 473 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 SLFN12LQ6IEE8 588 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 ARNTL2Q8WYA1 636 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 RSPH1Q8WYR4 309 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 POMGNT1Q8WZA1 660 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 CLP1Q92989 425 aaKnown RBP18.41■□□□□ 0.54
RER1-208ENST00000493207 RPS6KC1Q96S38 1066 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 SEMA6BQ9H3T3 888 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 TBC1D13Q9NVG8 400 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 RMND1Q9NWS8 449 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 STYXL1Q9Y6J8 313 aa18.41■□□□□ 0.54
RER1-208ENST00000493207 OGTO15294 1046 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 ADSSP30520 456 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 CTNNB1P35222 781 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 YARSP54577 528 aaKnown RBP18.4■□□□□ 0.54
RER1-208ENST00000493207 ERVK-21P61565 698 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 BMT2Q1RMZ1 405 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 DEFB123Q8N688 67 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 ACAP3Q96P50 834 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 GSDMAQ96QA5 445 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 GBP3Q9H0R5 595 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 KANSL3Q9P2N6 904 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 AGO2Q9UKV8 859 aaKnown RBP18.4■□□□□ 0.54
RER1-208ENST00000493207 RWDD3Q9Y3V2 267 aa18.4■□□□□ 0.54
RER1-208ENST00000493207 PDCD11Q14690 1871 aaKnown RBP18.39■□□□□ 0.54
RER1-208ENST00000493207 EPOPA6NHQ4 379 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 INPPL1O15357 1258 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 FAM189A1O60320 539 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 TNFSF9P41273 254 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 KNOP1Q1ED39 458 aaKnown RBP18.39■□□□□ 0.53
RER1-208ENST00000493207 EPC2Q52LR7 807 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 ZBTB41Q5SVQ8 909 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 GSTCDQ8NEC7 633 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 FBXO22Q8NEZ5 403 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 SPATA20Q8TB22 786 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 SAMD11Q96NU1 681 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 PCIF1Q9H4Z3 704 aa18.39■□□□□ 0.53
RER1-208ENST00000493207 TOPORSQ9NS56 1045 aaPredicted RBP18.39■□□□□ 0.53
RER1-208ENST00000493207 TGFB1I1O43294 461 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 ZC3H11AO75152 810 aaKnown RBP eCLIP18.38■□□□□ 0.53
RER1-208ENST00000493207 CXCL8P10145 99 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 LAG3P18627 525 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 GARTP22102 1010 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 BMPR1AP36894 532 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 PBX3P40426 434 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 ACOT2P49753 483 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 GRIN2CQ14957 1233 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 KYAT1Q16773 422 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 ARMCX5Q6P1M9 558 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 ZNF280BQ86YH2 543 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 SMYD4Q8IYR2 804 aaPredicted RBP18.38■□□□□ 0.53
RER1-208ENST00000493207 COLGALT1Q8NBJ5 622 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 SAAL1Q96ER3 474 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 FAM193BQ96PV7 902 aaPredicted RBP18.38■□□□□ 0.53
RER1-208ENST00000493207 CBWD1Q9BRT8 395 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 CLSTN2Q9H4D0 955 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 PRDM12Q9H4Q4 367 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 NRDE2Q9H7Z3 1164 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 AAASQ9NRG9 546 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 PLAGL2Q9UPG8 496 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 MAPK8IP1Q9UQF2 711 aa18.38■□□□□ 0.53
RER1-208ENST00000493207 ANK1P16157 1881 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 PLXNA4Q9HCM2 1894 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 RFXAPO00287 272 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 PTGESO14684 152 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 MEFVO15553 781 aaPredicted RBP18.37■□□□□ 0.53
RER1-208ENST00000493207 B4GALT3O60512 393 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 DDHD2O94830 711 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 CLTAP09496 248 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 GRIK3Q13003 919 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 GLRA4Q5JXX5 417 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 ZNF658Q5TYW1 1059 aaPredicted RBP18.37■□□□□ 0.53
RER1-208ENST00000493207 ISM2Q6H9L7 571 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 ALKAL1Q6UXT8 129 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 ZSWIM2Q8NEG5 633 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 GDPD5Q8WTR4 605 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
RER1-208ENST00000493207 SNX27Q96L92 541 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 AGPAT3Q9NRZ7 376 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 DNAJB4Q9UDY4 337 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 CPSF3Q9UKF6 684 aaKnown RBP18.37■□□□□ 0.53
RER1-208ENST00000493207 MAN1B1Q9UKM7 699 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 PCDHB12Q9Y5F1 795 aa18.37■□□□□ 0.53
RER1-208ENST00000493207 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms