RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 HOOK1Q9UJC3 728 aaKnown RBP12.08□□□□□ -0.48
UBE4B-210ENST00000488228 EXOC7Q9UPT5 735 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 PCDHA5Q9Y5H7 936 aa12.08□□□□□ -0.48
UBE4B-210ENST00000488228 TSC2P49815 1807 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 ARL5CA6NH57 179 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 EPOPA6NHQ4 379 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 BIN1O00499 593 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 OFD1O75665 1012 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 POMCP01189 267 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 LINC00271P0C7V0 271 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 CXCL8P10145 99 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 ADSSP30520 456 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 PBX3P40426 434 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 GRM5P41594 1212 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 NOMO2Q5JPE7 1267 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 LRRC55Q6ZSA7 311 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 Q7L0L9 218 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 ZSWIM2Q8NEG5 633 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 SPATA20Q8TB22 786 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF507Q8TCN5 953 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 URGCPQ8TCY9 931 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 POMGNT1Q8WZA1 660 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 FAM161BQ96MY7 647 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 CCDC94Q9BW85 323 aaPredicted RBP12.07□□□□□ -0.48
UBE4B-210ENST00000488228 MRPL9Q9BYD2 267 aaKnown RBP12.07□□□□□ -0.48
UBE4B-210ENST00000488228 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 NUP62CLQ9H1M0 184 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 MAN1B1Q9UKM7 699 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 PLAGL2Q9UPG8 496 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 VWA8A3KMH1 1905 aa12.07□□□□□ -0.48
UBE4B-210ENST00000488228 A0A0B4J269 797 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 PTGESO14684 152 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 OGTO15294 1046 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 TGFB1I1O43294 461 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ZC3H11AO75152 810 aaKnown RBP eCLIP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 MCM4P33991 863 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 CTNNB1P35222 781 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 PSMD2Q13200 908 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 SPOUT1Q5T280 376 aaKnown RBP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF697Q5TEC3 545 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 GSTCDQ8NEC7 633 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 NOC3LQ8WTT2 800 aaKnown RBP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ARNTL2Q8WYA1 636 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 SNX27Q96L92 541 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 GSDMAQ96QA5 445 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 RPS6KC1Q96S38 1066 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF576Q9H609 170 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 TMEM206Q9H813 350 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 AGPAT3Q9NRZ7 376 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 TYW1Q9NV66 732 aaKnown RBP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 RMND1Q9NWS8 449 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 CACNG4Q9UBN1 327 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 AGO2Q9UKV8 859 aaKnown RBP12.06□□□□□ -0.48
UBE4B-210ENST00000488228 GIT1Q9Y2X7 761 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 STYXL1Q9Y6J8 313 aa12.06□□□□□ -0.48
UBE4B-210ENST00000488228 SCN1AP35498 2009 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 PRRC2BQ5JSZ5 2229 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 GOLGA8IPA6NC78 632 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 GOLGA8JA6NMD2 632 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 INPPL1O15357 1258 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 ACOT2P49753 483 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 CYP2J2P51589 502 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 YARSP54577 528 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 RNASELQ05823 741 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 GRIK3Q13003 919 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 ENOX2Q16206 610 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 KNOP1Q1ED39 458 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 SLFN12LQ6IEE8 588 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 ARMCX5Q6P1M9 558 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF280BQ86YH2 543 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 GDPD5Q8WTR4 605 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 CLP1Q92989 425 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 ACAP3Q96P50 834 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 TGS1Q96RS0 853 aaKnown RBP12.05□□□□□ -0.48
UBE4B-210ENST00000488228 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 CWH43Q9H720 699 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 UBN1Q9NPG3 1134 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 MIOSQ9NXC5 875 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 DNAJB4Q9UDY4 337 aa12.05□□□□□ -0.48
UBE4B-210ENST00000488228 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 CLIC2O15247 247 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 DDHD2O94830 711 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 CSPG5O95196 566 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 MBD3O95983 291 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 CLTAP09496 248 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 LAG3P18627 525 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 BMP6P22004 513 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 GARTP22102 1010 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 ERVK-21P61565 698 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 SPAG1Q07617 926 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 EPC2Q52LR7 807 aa12.04□□□□□ -0.48
UBE4B-210ENST00000488228 ZNF658Q5TYW1 1059 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-210ENST00000488228 HS2ST1Q7LGA3 356 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms