RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 RPS6KC1Q96S38 1066 aa20.81■□□□□ 0.92
ATG9A-221ENST00000486766 CBWD1Q9BRT8 395 aa20.81■□□□□ 0.92
ATG9A-221ENST00000486766 RC3H2Q9HBD1 1191 aaKnown RBP20.81■□□□□ 0.92
ATG9A-221ENST00000486766 TYW1Q9NV66 732 aaKnown RBP20.81■□□□□ 0.92
ATG9A-221ENST00000486766 KLK14Q9P0G3 267 aa20.81■□□□□ 0.92
ATG9A-221ENST00000486766 CGNQ9P2M7 1197 aaKnown RBP20.81■□□□□ 0.92
ATG9A-221ENST00000486766 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 LCHNA4D1U4 455 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 ARL5CA6NH57 179 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 CLIC2O15247 247 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 TGFB1I1O43294 461 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 OFD1O75665 1012 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 SNRPFP62306 86 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 CAVIN1Q6NZI2 390 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 TMEM192Q8IY95 271 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 CMTR2Q8IYT2 770 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 GAD1Q99259 594 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 MRPL9Q9BYD2 267 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 KCTD10Q9H3F6 313 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 PCIF1Q9H4Z3 704 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 AGPAT3Q9NRZ7 376 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 TOPORSQ9NS56 1045 aaPredicted RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 YBX2Q9Y2T7 364 aaKnown RBP20.8■□□□□ 0.92
ATG9A-221ENST00000486766 TRIOBPQ9H2D6 2365 aa20.8■□□□□ 0.92
ATG9A-221ENST00000486766 PDXKO00764 312 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 CALUO43852 315 aaPredicted RBP20.79■□□□□ 0.92
ATG9A-221ENST00000486766 CA3P07451 260 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 DNAJB2P25686 324 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 TNFSF9P41273 254 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 KLHL40Q2TBA0 621 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 COBLL1Q53SF7 1204 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 NOMO2Q5JPE7 1267 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 LRRC43Q8N309 656 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 FIBCD1Q8N539 461 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 RSPH1Q8WYR4 309 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 SAAL1Q96ER3 474 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 ZFP42Q96MM3 310 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 NKX2-4Q9H2Z4 354 aa20.79■□□□□ 0.92
ATG9A-221ENST00000486766 KIAA0391O15091 583 aaKnown RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 FAM189A1O60320 539 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 LDHAP00338 332 aaKnown RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 CLTAP09496 248 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 PPP1R2P41236 205 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 ACOT2P49753 483 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 CYP2J2P51589 502 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 RNASELQ05823 741 aaKnown RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 ZBTB41Q5SVQ8 909 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 SPOUT1Q5T280 376 aaKnown RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 SP7Q8TDD2 431 aaPredicted RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 RPF1Q9H9Y2 349 aaKnown RBP20.78■□□□□ 0.92
ATG9A-221ENST00000486766 HSPBP1Q9NZL4 362 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 TMEM63CQ9P1W3 806 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 LAMA3Q16787 3333 aa20.78■□□□□ 0.92
ATG9A-221ENST00000486766 GOLGA8IPA6NC78 632 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 GOLGA8JA6NMD2 632 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 PSMA7O14818 248 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 POMCP01189 267 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 CXCL8P10145 99 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 BMP6P22004 513 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 SCNN1GP51170 649 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 PPP2R3AQ06190 1150 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 NFKBIBQ15653 356 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 SKOR2Q2VWA4 1001 aaPredicted RBP20.77■□□□□ 0.92
ATG9A-221ENST00000486766 PPP2R2DQ66LE6 453 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 KLHL10Q6JEL2 608 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 ADSSL1Q8N142 457 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 GPD1LQ8N335 351 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 TIFAQ96CG3 184 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 FAM212AQ96EL1 285 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 SNX27Q96L92 541 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 TSG101Q99816 390 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 FAM213AQ9BRX8 229 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 TBC1D13Q9NVG8 400 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 KANSL3Q9P2N6 904 aa20.77■□□□□ 0.92
ATG9A-221ENST00000486766 CPSF3Q9UKF6 684 aaKnown RBP20.77■□□□□ 0.92
ATG9A-221ENST00000486766 TULP1O00294 542 aaPredicted RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 EXTL3O43909 919 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 CD44P16070 742 aaKnown RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 AFF1P51825 1210 aaKnown RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 HABP4Q5JVS0 413 aaKnown RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 RBM43Q6ZSC3 357 aaKnown RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 C12orf56Q8IXR9 622 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 ZSWIM2Q8NEG5 633 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 FAM193BQ96PV7 902 aaPredicted RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 SEMA6BQ9H3T3 888 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 SLC28A3Q9HAS3 691 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 TRAF3IP3Q9Y228 551 aa20.76■□□□□ 0.91
ATG9A-221ENST00000486766 MRPL42Q9Y6G3 142 aaKnown RBP20.76■□□□□ 0.91
ATG9A-221ENST00000486766 LINC01553A4QN01 128 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 SOX1O00570 391 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-221ENST00000486766 INPPL1O15357 1258 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 NR3C1P04150 777 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 NLRP12P59046 1061 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 GRIK3Q13003 919 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 HSP90AA2PQ14568 343 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-221ENST00000486766 ENOX2Q16206 610 aaKnown RBP20.75■□□□□ 0.91
ATG9A-221ENST00000486766 GLRA4Q5JXX5 417 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 XXYLT1Q8NBI6 393 aa20.75■□□□□ 0.91
ATG9A-221ENST00000486766 DHTKD1Q96HY7 919 aaPredicted RBP20.75■□□□□ 0.91
ATG9A-221ENST00000486766 MIOSQ9NXC5 875 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms