RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TMEM63CQ9P1W3 806 aa21.74■■□□□ 1.07
COL6A2-208ENST00000485591 PDXKO00764 312 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 OFD1O75665 1012 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 TMEM192Q8IY95 271 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 ADSSL1Q8N142 457 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 SYAP1Q96A49 352 aaPredicted RBP21.73■■□□□ 1.07
COL6A2-208ENST00000485591 CASD1Q96PB1 797 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 PARP2Q9UGN5 583 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 TRAF3IP3Q9Y228 551 aa21.73■■□□□ 1.07
COL6A2-208ENST00000485591 RANBP2P49792 3224 aaKnown RBP21.73■■□□□ 1.07
COL6A2-208ENST00000485591 TBKBP1A7MCY6 615 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 LDHAP00338 332 aaKnown RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 CLTAP09496 248 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 PBX2P40425 430 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 MLH1P40692 756 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 YARSP54577 528 aaKnown RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 OSTNP61366 133 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 STIM1Q13586 685 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 SEZ6Q53EL9 994 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 LRRC43Q8N309 656 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 TMEM174Q8WUU8 243 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 ACAP3Q96P50 834 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 GAD1Q99259 594 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 MRPL9Q9BYD2 267 aaKnown RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 TOPORSQ9NS56 1045 aaPredicted RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 MSRAQ9UJ68 235 aa21.72■■□□□ 1.07
COL6A2-208ENST00000485591 CPSF3Q9UKF6 684 aaKnown RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 YBX2Q9Y2T7 364 aaKnown RBP21.72■■□□□ 1.07
COL6A2-208ENST00000485591 LCHNA4D1U4 455 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 ARL5CA6NH57 179 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 MYOGP15173 224 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 TNFSF9P41273 254 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 POU5F1Q01860 360 aaKnown RBP21.71■■□□□ 1.07
COL6A2-208ENST00000485591 BTG3Q14201 252 aaPredicted RBP21.71■■□□□ 1.07
COL6A2-208ENST00000485591 NFKBIBQ15653 356 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
COL6A2-208ENST00000485591 PAN2Q504Q3 1202 aaKnown RBP21.71■■□□□ 1.07
COL6A2-208ENST00000485591 ZCWPW2Q504Y3 356 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 NOMO2Q5JPE7 1267 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 ZBTB41Q5SVQ8 909 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 CAVIN1Q6NZI2 390 aaKnown RBP21.71■■□□□ 1.07
COL6A2-208ENST00000485591 URGCPQ8TCY9 931 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 SNX27Q96L92 541 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 ZFP42Q96MM3 310 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 HSPBP1Q9NZL4 362 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 KLK14Q9P0G3 267 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 INPP5FQ9Y2H2 1132 aa21.71■■□□□ 1.07
COL6A2-208ENST00000485591 TRIOBPQ9H2D6 2365 aa21.7■■□□□ 1.07
COL6A2-208ENST00000485591 PPP1R3GB7ZBB8 358 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 PSMA7O14818 248 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CLIC2O15247 247 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CALUO43852 315 aaPredicted RBP21.7■■□□□ 1.06
COL6A2-208ENST00000485591 EXTL3O43909 919 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CA3P07451 260 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CD44P16070 742 aaKnown RBP21.7■■□□□ 1.06
COL6A2-208ENST00000485591 DNAJB2P25686 324 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 NFIL3Q16649 462 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CENPPQ6IPU0 288 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 CRELD2Q6UXH1 353 aaPredicted RBP21.7■■□□□ 1.06
COL6A2-208ENST00000485591 GPD1LQ8N335 351 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 FIBCD1Q8N539 461 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 GSTCDQ8NEC7 633 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 SAAL1Q96ER3 474 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 DHTKD1Q96HY7 919 aaPredicted RBP21.7■■□□□ 1.06
COL6A2-208ENST00000485591 RPS6KC1Q96S38 1066 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 SEMA6BQ9H3T3 888 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 PCIF1Q9H4Z3 704 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 KANSL3Q9P2N6 904 aa21.7■■□□□ 1.06
COL6A2-208ENST00000485591 MEFVO15553 781 aaPredicted RBP21.69■■□□□ 1.06
COL6A2-208ENST00000485591 CXCL8P10145 99 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 ACOT2P49753 483 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 SCNN1GP51170 649 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 AFF1P51825 1210 aaKnown RBP21.69■■□□□ 1.06
COL6A2-208ENST00000485591 MYBPC2Q14324 1141 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 HSP90AA2PQ14568 343 aaPredicted RBP21.69■■□□□ 1.06
COL6A2-208ENST00000485591 ENOX2Q16206 610 aaKnown RBP21.69■■□□□ 1.06
COL6A2-208ENST00000485591 EDRF1Q3B7T1 1238 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 SLC10A6Q3KNW5 377 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 XKR4Q5GH76 650 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 ALKAL1Q6UXT8 129 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 SLC9A9Q8IVB4 645 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 FBXL18Q96ME1 805 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 FAM213AQ9BRX8 229 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
COL6A2-208ENST00000485591 PLEKHA5Q9HAU0 1116 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 KIAA1586Q9HCI6 787 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 TBC1D13Q9NVG8 400 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 CNTN3Q9P232 1028 aa21.69■■□□□ 1.06
COL6A2-208ENST00000485591 TTC26A0AVF1 554 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 LINC01553A4QN01 128 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 PTGESO14684 152 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 NR3C1P04150 777 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 ADRB2P07550 413 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 CYP2J2P51589 502 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 NLRP12P59046 1061 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 GRIK3Q13003 919 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 LRRC55Q6ZSA7 311 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 MLKLQ8NB16 471 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 XXYLT1Q8NBI6 393 aa21.68■■□□□ 1.06
COL6A2-208ENST00000485591 ZSWIM2Q8NEG5 633 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms