RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 EXOC7Q9UPT5 735 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 GIT1Q9Y2X7 761 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
ABCF3-213ENST00000480539 RFXAPO00287 272 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 EIF3DO15371 548 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCF3-213ENST00000480539 ZC3H11AO75152 810 aaKnown RBP eCLIP16.55■□□□□ 0.24
ABCF3-213ENST00000480539 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 EPM2AIP1Q7L775 607 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-213ENST00000480539 COLGALT1Q8NBJ5 622 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 KIAA0895Q8NCT3 520 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 TIGD1Q96MW7 591 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 GUCD1Q96NT3 240 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 MSTO1Q9BUK6 570 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
ABCF3-213ENST00000480539 CXCL16Q9H2A7 254 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 PLAGL2Q9UPG8 496 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
ABCF3-213ENST00000480539 UBE4BO95155 1302 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 INPPL1O15357 1258 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 CSPG5O95196 566 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 LAG3P18627 525 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 BMPR1AP36894 532 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 TNFSF9P41273 254 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 STK4Q13043 487 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 GLRA4Q5JXX5 417 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 ZNF280BQ86YH2 543 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 SCFD1Q8WVM8 642 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
ABCF3-213ENST00000480539 SNX27Q96L92 541 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 SAMD11Q96NU1 681 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 LMBRD1Q9NUN5 540 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 MTMR10Q9NXD2 777 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
ABCF3-213ENST00000480539 A0A0B4J269 797 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 PTGESO14684 152 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 OGTO15294 1046 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 FAM189A1O60320 539 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 RHOBTB3O94955 611 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 CXCL8P10145 99 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 HOXD13P35453 343 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 YARSP54577 528 aaKnown RBP16.53■□□□□ 0.24
ABCF3-213ENST00000480539 RSPH1Q8WYR4 309 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 POMGNT1Q8WZA1 660 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 ZNF558Q96NG5 402 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 CDX2Q99626 313 aaPredicted RBP16.53■□□□□ 0.24
ABCF3-213ENST00000480539 NRDE2Q9H7Z3 1164 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 TMEM206Q9H813 350 aa16.53■□□□□ 0.24
ABCF3-213ENST00000480539 NT5C1B-RDH14C9J2C7 533 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 MEFVO15553 781 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 DDHD2O94830 711 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 ADSSP30520 456 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 BCAR1P56945 870 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 GRIK3Q13003 919 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 ARMCX5Q6P1M9 558 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 KCNT2Q6UVM3 1135 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 SMYD4Q8IYR2 804 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 GSTCDQ8NEC7 633 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 ZNF507Q8TCN5 953 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 NOC3LQ8WTT2 800 aaKnown RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 SMARCE1Q969G3 411 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 SAAL1Q96ER3 474 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 ACAP3Q96P50 834 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 FAM193BQ96PV7 902 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 C11orf84Q9BUA3 381 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 PCIF1Q9H4Z3 704 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 AAASQ9NRG9 546 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 CACNG4Q9UBN1 327 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 HOOK1Q9UJC3 728 aaKnown RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 AGO2Q9UKV8 859 aaKnown RBP16.52■□□□□ 0.24
ABCF3-213ENST00000480539 PCDHB12Q9Y5F1 795 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 STYXL1Q9Y6J8 313 aa16.52■□□□□ 0.24
ABCF3-213ENST00000480539 C5orf67F2Z3F1 127 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 GOLGA6L22H0YM25 854 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 SMC2O95347 1197 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 SLC11A1P49279 550 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 ACOT2P49753 483 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 PSMD2Q13200 908 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 GPM6BQ13491 265 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 ADGRE1Q14246 886 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 KCNB1Q14721 858 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 SLFN12LQ6IEE8 588 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 KLHL23Q8NBE8 558 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 ZSWIM2Q8NEG5 633 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 GAS2L1Q99501 681 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-213ENST00000480539 PLVAPQ9BX97 442 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 PRG3Q9Y2Y8 225 aaPredicted RBP16.51■□□□□ 0.23
ABCF3-213ENST00000480539 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
ABCF3-213ENST00000480539 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
ABCF3-213ENST00000480539 PLXNA4Q9HCM2 1894 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 CASTOR2A6NHX0 329 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 H3BNC9 293 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 LPXNO60711 386 aa16.5■□□□□ 0.23
ABCF3-213ENST00000480539 ITGB1P05556 798 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms