RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 ZFP42Q96MM3 310 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 ZNF558Q96NG5 402 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 GSDMAQ96QA5 445 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 C17orf80Q9BSJ5 609 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 NUP62CLQ9H1M0 184 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 IKZF4Q9H2S9 585 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
SRRT-211ENST00000478693 TBC1D13Q9NVG8 400 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 KANSL3Q9P2N6 904 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 HCSTQ9UBK5 93 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 AGO2Q9UKV8 859 aaKnown RBP12.42□□□□□ -0.42
SRRT-211ENST00000478693 PCDHB12Q9Y5F1 795 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 ZMYM2Q9UBW7 1377 aa12.42□□□□□ -0.42
SRRT-211ENST00000478693 ABLIM1O14639 778 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 CSPG5O95196 566 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 MBD3O95983 291 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 CXCL8P10145 99 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 KNOP1Q1ED39 458 aaKnown RBP12.41□□□□□ -0.42
SRRT-211ENST00000478693 GLRA4Q5JXX5 417 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 ISM2Q6H9L7 571 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 Q7L0L9 218 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 SPRED2Q7Z698 418 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 TMEM192Q8IY95 271 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 ELOA2Q8IYF1 753 aaPredicted RBP12.41□□□□□ -0.42
SRRT-211ENST00000478693 ZNF507Q8TCN5 953 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 GDPD5Q8WTR4 605 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 SAAL1Q96ER3 474 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 SNX27Q96L92 541 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 CLSTN2Q9H4D0 955 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 PCIF1Q9H4Z3 704 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 RPF1Q9H9Y2 349 aaKnown RBP12.41□□□□□ -0.42
SRRT-211ENST00000478693 MAPK8IP1Q9UQF2 711 aa12.41□□□□□ -0.42
SRRT-211ENST00000478693 GBF1Q92538 1859 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 A0A0B4J269 797 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 BIN1O00499 593 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 CLIC2O15247 247 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 CALUO43852 315 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 LDHAP00338 332 aaKnown RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 THP07101 528 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 CLTAP09496 248 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 GARTP22102 1010 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 PBX3P40426 434 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 TNFSF9P41273 254 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 CYP2J2P51589 502 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 ERVK-21P61565 698 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 STIM1Q13586 685 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 BMT2Q1RMZ1 405 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 EPC2Q52LR7 807 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 ZNF658Q5TYW1 1059 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 GPR153Q6NV75 609 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 DEFB123Q8N688 67 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 COLGALT1Q8NBJ5 622 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 GOLGA5Q8TBA6 731 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 CBWD1Q9BRT8 395 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 FAM213AQ9BRX8 229 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 C11orf84Q9BUA3 381 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 HAPLN2Q9GZV7 340 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 TTYH1Q9H313 450 aaPredicted RBP12.4□□□□□ -0.42
SRRT-211ENST00000478693 PRDM12Q9H4Q4 367 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 CWH43Q9H720 699 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 MAN1B1Q9UKM7 699 aa12.4□□□□□ -0.42
SRRT-211ENST00000478693 TTC3P53804 2025 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 GOLGA8IPA6NC78 632 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 GOLGA8JA6NMD2 632 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 KIAA0391O15091 583 aaKnown RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 PTMSP20962 102 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 MCM4P33991 863 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 PPM1AP35813 382 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 BMPR1AP36894 532 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 OR1G1P47890 313 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 ALDH7A1P49419 539 aaKnown RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 ACOT2P49753 483 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 GPM6BQ13491 265 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 ZBTB41Q5SVQ8 909 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 LRRC55Q6ZSA7 311 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 GPD1LQ8N335 351 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 TSG101Q99816 390 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 MIOSQ9NXC5 875 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 RBAKQ9NYW8 714 aaPredicted RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 HSPBP1Q9NZL4 362 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 PRG3Q9Y2Y8 225 aaPredicted RBP12.39□□□□□ -0.43
SRRT-211ENST00000478693 STYXL1Q9Y6J8 313 aa12.39□□□□□ -0.43
SRRT-211ENST00000478693 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
SRRT-211ENST00000478693 NT5C1B-RDH14C9J2C7 533 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms