RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 MLH1P40692 756 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 GRM5P41594 1212 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 PMS1P54277 932 aaKnown RBP17.34■□□□□ 0.37
COPS3-207ENST00000477299 SPAG1Q07617 926 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 SLC10A6Q3KNW5 377 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 DCAF4L1Q3SXM0 396 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 HABP4Q5JVS0 413 aaKnown RBP17.34■□□□□ 0.37
COPS3-207ENST00000477299 STXBP4Q6ZWJ1 553 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 ZNF280BQ86YH2 543 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 FAM84AQ96KN4 292 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 GBP3Q9H0R5 595 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 CERS4Q9HA82 394 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 AGPAT3Q9NRZ7 376 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 RMND1Q9NWS8 449 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 CACNG4Q9UBN1 327 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 AGO2Q9UKV8 859 aaKnown RBP17.34■□□□□ 0.37
COPS3-207ENST00000477299 PCDHA11Q9Y5I1 949 aa17.34■□□□□ 0.37
COPS3-207ENST00000477299 MRPL42Q9Y6G3 142 aaKnown RBP17.34■□□□□ 0.37
COPS3-207ENST00000477299 UBE4BO95155 1302 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 LINC01553A4QN01 128 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 PTGESO14684 152 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 OGTO15294 1046 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 POMCP01189 267 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 LINC00271P0C7V0 271 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 SKIP12755 728 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 SCP2P22307 547 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 SCNN1GP51170 649 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 GLRA4Q5JXX5 417 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 ADSSL1Q8N142 457 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 GUF1Q8N442 669 aaKnown RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 NOC3LQ8WTT2 800 aaKnown RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 PGBD4Q96DM1 585 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 ZMAT2Q96NC0 199 aaKnown RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 TMEM117Q9H0C3 514 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 CWH43Q9H720 699 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
COPS3-207ENST00000477299 INSL6Q9Y581 213 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 PLXNA4Q9HCM2 1894 aa17.33■□□□□ 0.36
COPS3-207ENST00000477299 TRIM49BA6NDI0 452 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 DDHD2O94830 711 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 CXCL8P10145 99 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 IGFBP6P24592 240 aaPredicted RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 DNAJB2P25686 324 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 ABCD1P33897 745 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 PBX3P40426 434 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 CYP2J2P51589 502 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 SMAD3P84022 425 aaKnown RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 BTG3Q14201 252 aaPredicted RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 ENOX2Q16206 610 aaKnown RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 NOMO2Q5JPE7 1267 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 ARMCX5Q6P1M9 558 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 ALKAL1Q6UXT8 129 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 FAM43BQ6ZT52 329 aaPredicted RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 RABGGTAQ92696 567 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 EEF2KMTQ96G04 330 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 ACAP3Q96P50 834 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 MED15Q96RN5 788 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 FAM213AQ9BRX8 229 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 TBC1D13Q9NVG8 400 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 HSPBP1Q9NZL4 362 aa17.32■□□□□ 0.36
COPS3-207ENST00000477299 CPSF3Q9UKF6 684 aaKnown RBP17.32■□□□□ 0.36
COPS3-207ENST00000477299 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 GARTP22102 1010 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 CASP4P49662 377 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 TAP1Q03518 808 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 ANKRD40Q6AI12 368 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 SCARA3Q6AZY7 606 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 SLFN12LQ6IEE8 588 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 GLB1LQ6UWU2 654 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 RBM43Q6ZSC3 357 aaKnown RBP17.31■□□□□ 0.36
COPS3-207ENST00000477299 CBWD2Q8IUF1 395 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 C17orf80Q9BSJ5 609 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 DNAJB4Q9UDY4 337 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
COPS3-207ENST00000477299 ATG2AQ2TAZ0 1938 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 TULP1O00294 542 aaPredicted RBP17.3■□□□□ 0.36
COPS3-207ENST00000477299 PDXKO00764 312 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 ADRB2P07550 413 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 CLTAP09496 248 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 STX17P56962 302 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 NAB2Q15742 525 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 ZCWPW2Q504Y3 356 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 CMTR2Q8IYT2 770 aaKnown RBP17.3■□□□□ 0.36
COPS3-207ENST00000477299 FIBCD1Q8N539 461 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 FAM212AQ96EL1 285 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 SNX27Q96L92 541 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 CCDC94Q9BW85 323 aaPredicted RBP17.3■□□□□ 0.36
COPS3-207ENST00000477299 NRDE2Q9H7Z3 1164 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 DMAC2Q9NW81 257 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 CHD9Q3L8U1 2897 aa17.3■□□□□ 0.36
COPS3-207ENST00000477299 SMIM28A0A1B0GU29 152 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms