RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 OSTNP61366 133 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 ERVK-21P61565 698 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 POMGNT1Q8WZA1 660 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 ACAP3Q96P50 834 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 HAPLN2Q9GZV7 340 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 GBP3Q9H0R5 595 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 AAASQ9NRG9 546 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 TBC1D13Q9NVG8 400 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 PCDHA5Q9Y5H7 936 aa32.28■■■□□ 2.76
HOXB3-208ENST00000476342 TISP43B9A030 160 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 OGTO15294 1046 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 SPATA20Q8TB22 786 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 ZFP42Q96MM3 310 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 IKZF4Q9H2S9 585 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 SEMA6BQ9H3T3 888 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 KLK14Q9P0G3 267 aa32.27■■■□□ 2.76
HOXB3-208ENST00000476342 LAG3P18627 525 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 LRRC55Q6ZSA7 311 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 NELFCDQ8IXH7 590 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 TMEM192Q8IY95 271 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 ARNTL2Q8WYA1 636 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 C17orf80Q9BSJ5 609 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 CWH43Q9H720 699 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 CERS4Q9HA82 394 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 MTUS1Q9ULD2 1270 aa32.26■■■□□ 2.76
HOXB3-208ENST00000476342 POMCP01189 267 aa32.26■■■□□ 2.75
HOXB3-208ENST00000476342 GARTP22102 1010 aa32.26■■■□□ 2.75
HOXB3-208ENST00000476342 CTNNB1P35222 781 aa32.26■■■□□ 2.75
HOXB3-208ENST00000476342 SCNN1GP51170 649 aa32.26■■■□□ 2.75
HOXB3-208ENST00000476342 ERCC4Q92889 916 aaPredicted RBP32.26■■■□□ 2.75
HOXB3-208ENST00000476342 FAM193BQ96PV7 902 aaPredicted RBP32.26■■■□□ 2.75
HOXB3-208ENST00000476342 GTPBP4Q9BZE4 634 aaKnown RBP32.26■■■□□ 2.75
HOXB3-208ENST00000476342 AGO2Q9UKV8 859 aaKnown RBP32.26■■■□□ 2.75
HOXB3-208ENST00000476342 CDH23Q9H251 3354 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 MYO9BQ13459 2157 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 CLTAP09496 248 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 LINC00271P0C7V0 271 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 HOXD13P35453 343 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 AFF1P51825 1210 aaKnown RBP32.25■■■□□ 2.75
HOXB3-208ENST00000476342 SNRPFP62306 86 aaKnown RBP32.25■■■□□ 2.75
HOXB3-208ENST00000476342 KNOP1Q1ED39 458 aaKnown RBP32.25■■■□□ 2.75
HOXB3-208ENST00000476342 ARMCX5Q6P1M9 558 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 HS2ST1Q7LGA3 356 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 SPRED2Q7Z698 418 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 PLVAPQ9BX97 442 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 HCSTQ9UBK5 93 aa32.25■■■□□ 2.75
HOXB3-208ENST00000476342 CARNS1A5YM72 827 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 ADSSP30520 456 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 BMPR1AP36894 532 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 GRIK3Q13003 919 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 EPC2Q52LR7 807 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 SEZ6Q53EL9 994 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 DEFB123Q8N688 67 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 FBXO22Q8NEZ5 403 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 FAM161BQ96MY7 647 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 CHD7Q9P2D1 2997 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 CGNQ9P2M7 1197 aaKnown RBP32.24■■■□□ 2.75
HOXB3-208ENST00000476342 PCDHB12Q9Y5F1 795 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 TRIP11Q15643 1979 aa32.24■■■□□ 2.75
HOXB3-208ENST00000476342 FAM189A1O60320 539 aa32.23■■■□□ 2.75
HOXB3-208ENST00000476342 RB1P06400 928 aa32.23■■■□□ 2.75
HOXB3-208ENST00000476342 GSTCDQ8NEC7 633 aa32.23■■■□□ 2.75
HOXB3-208ENST00000476342 MIOSQ9NXC5 875 aa32.23■■■□□ 2.75
HOXB3-208ENST00000476342 C5orf67F2Z3F1 127 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 KIAA0391O15091 583 aaKnown RBP32.22■■■□□ 2.75
HOXB3-208ENST00000476342 ZC3H11AO75152 810 aaKnown RBP eCLIP32.22■■■□□ 2.75
HOXB3-208ENST00000476342 LDHAP00338 332 aaKnown RBP32.22■■■□□ 2.75
HOXB3-208ENST00000476342 CAMK4Q16566 473 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 ZNF658Q5TYW1 1059 aaPredicted RBP32.22■■■□□ 2.75
HOXB3-208ENST00000476342 Q7L0L9 218 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 COLGALT1Q8NBJ5 622 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 GOLGA5Q8TBA6 731 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 SNX27Q96L92 541 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 ZNF558Q96NG5 402 aa32.22■■■□□ 2.75
HOXB3-208ENST00000476342 TGFB1I1O43294 461 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 THP07101 528 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 CBWD1Q9BRT8 395 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 C11orf84Q9BUA3 381 aaPredicted RBP32.21■■■□□ 2.75
HOXB3-208ENST00000476342 CLSTN2Q9H4D0 955 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 NRDE2Q9H7Z3 1164 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 RPF1Q9H9Y2 349 aaKnown RBP32.21■■■□□ 2.75
HOXB3-208ENST00000476342 PLEKHA5Q9HAU0 1116 aa32.21■■■□□ 2.75
HOXB3-208ENST00000476342 CXCL8P10145 99 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 TNFSF9P41273 254 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 ALDH7A1P49419 539 aaKnown RBP32.2■■■□□ 2.75
HOXB3-208ENST00000476342 GRIN2CQ14957 1233 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 KCNT2Q6UVM3 1135 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 ZNF280BQ86YH2 543 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 GUF1Q8N442 669 aaKnown RBP32.2■■■□□ 2.75
HOXB3-208ENST00000476342 P2RX5Q93086 422 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 AGPAT3Q9NRZ7 376 aa32.2■■■□□ 2.75
HOXB3-208ENST00000476342 CPSF3Q9UKF6 684 aaKnown RBP32.2■■■□□ 2.75
HOXB3-208ENST00000476342 PTGESO14684 152 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 MBD3O95983 291 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 PPM1AP35813 382 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 ACOT2P49753 483 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 POU5F1Q01860 360 aaKnown RBP32.19■■■□□ 2.74
HOXB3-208ENST00000476342 PPP2R3AQ06190 1150 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 XKR4Q5GH76 650 aa32.19■■■□□ 2.74
HOXB3-208ENST00000476342 ZBTB41Q5SVQ8 909 aa32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms