RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 STXBP4Q6ZWJ1 553 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 APBB1IPQ7Z5R6 666 aaPredicted RBP20.7■□□□□ 0.9
LMNB1-204ENST00000463908 NELFCDQ8IXH7 590 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 HACE1Q8IYU2 909 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 ABI1Q8IZP0 508 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 SYCP3Q8IZU3 236 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 GPT2Q8TD30 523 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 GSDMAQ96QA5 445 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 TBC1D13Q9NVG8 400 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 INPP5FQ9Y2H2 1132 aa20.7■□□□□ 0.9
LMNB1-204ENST00000463908 FNDC1Q4ZHG4 1894 aaPredicted RBP20.69■□□□□ 0.9
LMNB1-204ENST00000463908 B4GALT3O60512 393 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 POMCP01189 267 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 MATR3P43243 847 aaKnown RBP eCLIP20.69■□□□□ 0.9
LMNB1-204ENST00000463908 CAMK4Q16566 473 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 SLFN12LQ6IEE8 588 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 ALKAL1Q6UXT8 129 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 ZNF280BQ86YH2 543 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 ZSWIM2Q8NEG5 633 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 HOOK1Q9UJC3 728 aaKnown RBP20.69■□□□□ 0.9
LMNB1-204ENST00000463908 CDH23Q9H251 3354 aa20.69■□□□□ 0.9
LMNB1-204ENST00000463908 TMEM265A0A087WTH1 108 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 EPOPA6NHQ4 379 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 OGTO15294 1046 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 DDHD2O94830 711 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 SMC2O95347 1197 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 BMPR1AP36894 532 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 TNFSF9P41273 254 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 SCNN1GP51170 649 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 GRIN2CQ14957 1233 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 KNOP1Q1ED39 458 aaKnown RBP20.68■□□□□ 0.9
LMNB1-204ENST00000463908 SLC10A6Q3KNW5 377 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 XKR4Q5GH76 650 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 SMARCE1Q969G3 411 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 CCDC47Q96A33 483 aaKnown RBP20.68■□□□□ 0.9
LMNB1-204ENST00000463908 ACAP3Q96P50 834 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 TGS1Q96RS0 853 aaKnown RBP20.68■□□□□ 0.9
LMNB1-204ENST00000463908 CBWD1Q9BRT8 395 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 MSTO1Q9BUK6 570 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 CCDC94Q9BW85 323 aaPredicted RBP20.68■□□□□ 0.9
LMNB1-204ENST00000463908 NRDE2Q9H7Z3 1164 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 MTUS1Q9ULD2 1270 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 PLAGL2Q9UPG8 496 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 PRUNE2Q8WUY3 3088 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 CHD9Q3L8U1 2897 aa20.68■□□□□ 0.9
LMNB1-204ENST00000463908 GOLGA6L22H0YM25 854 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 RFXAPO00287 272 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 PTGESO14684 152 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 MCM4P33991 863 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 EPC2Q52LR7 807 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 ZNF697Q5TEC3 545 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 CRELD2Q6UXH1 353 aaPredicted RBP20.67■□□□□ 0.9
LMNB1-204ENST00000463908 LRRC43Q8N309 656 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 RSPH1Q8WYR4 309 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 POMGNT1Q8WZA1 660 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 FAM161BQ96MY7 647 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 GBP3Q9H0R5 595 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 KANSL3Q9P2N6 904 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 CPSF3Q9UKF6 684 aaKnown RBP20.67■□□□□ 0.9
LMNB1-204ENST00000463908 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 AGO2Q9UKV8 859 aaKnown RBP20.67■□□□□ 0.9
LMNB1-204ENST00000463908 MAPK8IP1Q9UQF2 711 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 UBE4BO95155 1302 aa20.67■□□□□ 0.9
LMNB1-204ENST00000463908 CLTAP09496 248 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 BMP6P22004 513 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 GARTP22102 1010 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 NAB2Q15742 525 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 ISM2Q6H9L7 571 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 SMYD4Q8IYR2 804 aaPredicted RBP20.66■□□□□ 0.9
LMNB1-204ENST00000463908 URGCPQ8TCY9 931 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 ARNTL2Q8WYA1 636 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 MRPL9Q9BYD2 267 aaKnown RBP20.66■□□□□ 0.9
LMNB1-204ENST00000463908 KCTD10Q9H3F6 313 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 CLSTN2Q9H4D0 955 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 PCIF1Q9H4Z3 704 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 RMND1Q9NWS8 449 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 DNAJB4Q9UDY4 337 aa20.66■□□□□ 0.9
LMNB1-204ENST00000463908 SPTBN5Q9NRC6 3674 aaKnown RBP20.65■□□□□ 0.9
LMNB1-204ENST00000463908 C5orf67F2Z3F1 127 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 CLIC2O15247 247 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 ADRB2P07550 413 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 PBX3P40426 434 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 ACOT2P49753 483 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 ENOX2Q16206 610 aaKnown RBP20.65■□□□□ 0.9
LMNB1-204ENST00000463908 ZNF658Q5TYW1 1059 aaPredicted RBP20.65■□□□□ 0.9
LMNB1-204ENST00000463908 ZMAT2Q96NC0 199 aaKnown RBP20.65■□□□□ 0.9
LMNB1-204ENST00000463908 AGPAT3Q9NRZ7 376 aa20.65■□□□□ 0.9
LMNB1-204ENST00000463908 SMIM28A0A1B0GU29 152 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 TTC26A0AVF1 554 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 LPXNO60711 386 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 CXCL8P10145 99 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 PRCPP42785 496 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 YARSP54577 528 aaKnown RBP20.64■□□□□ 0.89
LMNB1-204ENST00000463908 DSC1Q08554 894 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 SPOUT1Q5T280 376 aaKnown RBP20.64■□□□□ 0.89
LMNB1-204ENST00000463908 KCNT2Q6UVM3 1135 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 COLGALT2Q8IYK4 626 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 GUF1Q8N442 669 aaKnown RBP20.64■□□□□ 0.89
LMNB1-204ENST00000463908 COLGALT1Q8NBJ5 622 aa20.64■□□□□ 0.89
LMNB1-204ENST00000463908 SAAL1Q96ER3 474 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms