RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 MIF4GDA9UHW6 222 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 C2CD2LO14523 706 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 GGPS1O95749 300 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 ALDH1B1P30837 517 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 MARCKSL1P49006 195 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 EVX2Q03828 476 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 KLC3Q6P597 504 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DNAJC19Q96DA6 116 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 ECSITQ9BQ95 431 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 TUBB6Q9BUF5 446 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 THAP2Q9H0W7 228 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.04□□□□□ -0.8
SYNPO2-204ENST00000448416 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 BAZ2AQ9UIF9 1905 aaKnown RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 RPL13P26373 211 aaKnown RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 ERFP50548 548 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 PPP2R3CQ969Q6 453 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 NSL1Q96IY1 281 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 CATSPER2Q96P56 530 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 ARL8BQ9NVJ2 186 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 PHRF1Q9P1Y6 1649 aaKnown RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 A0A0J9YVX5 310 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TCRBV7S2A1N4TA0A589 114 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 RAD21O60216 631 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 BAG2O95816 211 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 FGRP09769 529 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 CETN2P41208 172 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 CACNB1Q02641 598 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 ZNF653Q96CK0 615 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 DNAJC1Q96KC8 554 aaKnown RBP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 BRIP1Q9BX63 1249 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 WHRNQ9P202 907 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 GSTTP1A0A1W2PQM5 241 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 SMCO2A6NFE2 343 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TOM1O60784 492 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 SUPT3HO75486 399 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TCEA3O75764 348 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TROVE2P10155 538 aaKnown RBP eCLIP10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 TNFAIP3P21580 790 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 HPCAP84074 193 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 ZBTB16Q05516 673 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 LLGL1Q15334 1064 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 PDK4Q16654 411 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 CTC1Q2NKJ3 1217 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 OTOAQ7RTW8 1153 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 MAP7D3Q8IWC1 876 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 STK32BQ9NY57 414 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 NINJ2Q9NZG7 142 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 GCNT4Q9P109 453 aa10.03□□□□□ -0.8
SYNPO2-204ENST00000448416 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 RNASEH1O60930 286 aaKnown RBP10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 ITIH2P19823 946 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 CD151P48509 253 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 KRT17Q04695 432 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 ARHGAP24Q8N264 748 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 ZBTB8BQ8NAP8 495 aaPredicted RBP10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 SLC30A5Q8TAD4 765 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 CYTH2Q99418 400 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 TTC1Q99614 292 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 C6orf50Q9HD87 102 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 COG5Q9UP83 839 aa10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.02□□□□□ -0.8
SYNPO2-204ENST00000448416 A8MXQ7 604 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 ESRRAP11474 423 aaPredicted RBP10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 CA4P22748 312 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 PGM1P36871 562 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 ADARP55265 1226 aaKnown RBP10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 JAM2P57087 298 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 MEX3CQ5U5Q3 659 aaKnown RBP10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 ZSWIM1Q9BR11 485 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 KCTD10Q9H3F6 313 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 PCDH11YQ9BZA8 1340 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 PYGMP11217 842 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 ANPEPP15144 967 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 MUTP22033 750 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 AMPD1P23109 780 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 GNA11P29992 359 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 STAT4Q14765 748 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 EPHA7Q15375 998 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 TMEM63BQ5T3F8 832 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 RGS9BPQ6ZS82 235 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 FRMD5Q7Z6J6 570 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 PHLDB2Q86SQ0 1253 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 ZNF554Q86TJ5 538 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 SATL1Q86VE3 508 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 SLC13A5Q86YT5 568 aaPredicted RBP10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 FAM161BQ96MY7 647 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 MAF1Q9H063 256 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
SYNPO2-204ENST00000448416 HEY2Q9UBP5 337 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms