RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 EPM2AIP1Q7L775 607 aaPredicted RBP4.6□□□□□ -1.67
VPS41-207ENST00000439468 TMPRSS6Q8IU80 811 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 UNC5BQ8IZJ1 945 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 MAGEB6Q8N7X4 407 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 OR14C36Q8NHC7 312 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 CACTINQ8WUQ7 758 aaKnown RBP4.6□□□□□ -1.67
VPS41-207ENST00000439468 NRG4Q8WWG1 115 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 SORCS2Q96PQ0 1159 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 ACE2Q9BYF1 805 aaPredicted RBP4.6□□□□□ -1.67
VPS41-207ENST00000439468 SLC12A5Q9H2X9 1139 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 DNM3Q9UQ16 869 aa4.6□□□□□ -1.67
VPS41-207ENST00000439468 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 MTSS1O43312 755 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 PRAMEF4O60810 478 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 LY86O95711 162 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 SLPIP03973 132 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 GSPT1P15170 499 aaKnown RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 HK1P19367 917 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 EDNRBP24530 442 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 CASRP41180 1078 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 KRT85P78386 507 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 FHL2Q14192 279 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 ZNF267Q14586 743 aaPredicted RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 ADRM1Q16186 407 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 FAM214AQ32MH5 1076 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 HSP90AB2PQ58FF8 381 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 RRP12Q5JTH9 1297 aaKnown RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 MBNL2Q5VZF2 373 aaKnown RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 ABHD15Q6UXT9 468 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 GLB1L2Q8IW92 636 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 TCEAL8Q8IYN2 117 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 OR2I1PQ8NGU4 316 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 ZNF483Q8TF39 744 aaPredicted RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 COA7Q96BR5 231 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 WNT8AQ9H1J5 351 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 ING1Q9UK53 422 aaPredicted RBP4.59□□□□□ -1.67
VPS41-207ENST00000439468 LIMCH1Q9UPQ0 1083 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 HDAC5Q9UQL6 1122 aa4.59□□□□□ -1.67
VPS41-207ENST00000439468 AP1G1O43747 822 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 FAM20BO75063 409 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 RPS6KA4O75676 772 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 STC2O76061 302 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 SEC24DO94855 1032 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 ADH4P08319 380 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 MTHFD2P13995 350 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 LPOP22079 712 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 ADSLP30566 484 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 GPR15P49685 360 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 SLC5A3P53794 718 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 DUSP2Q05923 314 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 PPP3CAQ08209 521 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 IL10RAQ13651 578 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 UAP1L1Q3KQV9 507 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 C3orf36Q3SXR2 165 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 IGFL4Q6B9Z1 124 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 GLB1L3Q8NCI6 653 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 CLIP3Q96DZ5 547 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 C8orf48Q96LL4 319 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 FAM193BQ96PV7 902 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 CAMKK2Q96RR4 588 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 CPPED1Q9BRF8 314 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 GTPBP4Q9BZE4 634 aaKnown RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 PCED1AQ9H1Q7 454 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 MMRN2Q9H8L6 949 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 SLC52A1Q9NWF4 448 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 CEP72Q9P209 647 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 DDX20Q9UHI6 824 aaKnown RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 INTUQ9ULD6 942 aa4.58□□□□□ -1.68
VPS41-207ENST00000439468 PNMA8BQ9ULN7 279 aaPredicted RBP4.58□□□□□ -1.68
VPS41-207ENST00000439468 CCDC154A6NI56 674 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 VSTM5A8MXK1 200 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 GOLGA6L6A8MZA4 724 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 HTRA2O43464 458 aaPredicted RBP4.57□□□□□ -1.68
VPS41-207ENST00000439468 NARSO43776 548 aaKnown RBP4.57□□□□□ -1.68
VPS41-207ENST00000439468 TMEM127O75204 238 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 POU2F2P09086 479 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 CYP2C19P33261 490 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 NOMO1Q15155 1222 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 CCDC178Q5BJE1 867 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 IFIT1BQ5T764 474 aaKnown RBP4.57□□□□□ -1.68
VPS41-207ENST00000439468 NXNQ6DKJ4 435 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 MIER2Q8N344 545 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 MSL3Q8N5Y2 521 aaKnown RBP4.57□□□□□ -1.68
VPS41-207ENST00000439468 PPP1R14CQ8TAE6 165 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 RIN2Q8WYP3 895 aaPredicted RBP4.57□□□□□ -1.68
VPS41-207ENST00000439468 ST8SIA2Q92186 375 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 FATE1Q969F0 183 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 RAB24Q969Q5 203 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 TIFAQ96CG3 184 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 IL17RAQ96F46 866 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 MNTQ99583 582 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 SLC2A4RGQ9NR83 387 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 SCOCQ9UIL1 159 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 PCDHA13Q9Y5I0 950 aa4.57□□□□□ -1.68
VPS41-207ENST00000439468 A0A1W2PR48 441 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 MAP4K4O95819 1239 aaPredicted RBP4.56□□□□□ -1.68
VPS41-207ENST00000439468 MAKP20794 623 aa4.56□□□□□ -1.68
VPS41-207ENST00000439468 PDCP20941 246 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms