RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 KIAA1468Q9P260 1216 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 CGNQ9P2M7 1197 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 AGO2Q9UKV8 859 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
RFTN1-202ENST00000431547 MYH11P35749 1972 aa20.12■□□□□ 0.81
RFTN1-202ENST00000431547 KIAA0391O15091 583 aaKnown RBP20.11■□□□□ 0.81
RFTN1-202ENST00000431547 LINC00271P0C7V0 271 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 MLH1P40692 756 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 FXR1P51114 621 aaKnown RBP eCLIP20.11■□□□□ 0.81
RFTN1-202ENST00000431547 AFF1P51825 1210 aaKnown RBP20.11■□□□□ 0.81
RFTN1-202ENST00000431547 YARSP54577 528 aaKnown RBP20.11■□□□□ 0.81
RFTN1-202ENST00000431547 OSTNP61366 133 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 COBLL1Q53SF7 1204 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 ALKAL1Q6UXT8 129 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 HS2ST1Q7LGA3 356 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 GSTCDQ8NEC7 633 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 ZFP42Q96MM3 310 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 NUP62CLQ9H1M0 184 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 TOPORSQ9NS56 1045 aaPredicted RBP20.11■□□□□ 0.81
RFTN1-202ENST00000431547 TBC1D13Q9NVG8 400 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 KLK14Q9P0G3 267 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 MAN1B1Q9UKM7 699 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 INPP5FQ9Y2H2 1132 aa20.11■□□□□ 0.81
RFTN1-202ENST00000431547 LDHAP00338 332 aaKnown RBP20.1■□□□□ 0.81
RFTN1-202ENST00000431547 ERVK-21P61565 698 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 POU5F1Q01860 360 aaKnown RBP20.1■□□□□ 0.81
RFTN1-202ENST00000431547 SEZ6Q53EL9 994 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 XKR4Q5GH76 650 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 GOLGA5Q8TBA6 731 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 SAMD11Q96NU1 681 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 TGS1Q96RS0 853 aaKnown RBP20.1■□□□□ 0.81
RFTN1-202ENST00000431547 CBWD1Q9BRT8 395 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 KCTD10Q9H3F6 313 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 ZNF576Q9H609 170 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 CWH43Q9H720 699 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 AGPAT3Q9NRZ7 376 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 MIOSQ9NXC5 875 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 CPSF3Q9UKF6 684 aaKnown RBP20.1■□□□□ 0.81
RFTN1-202ENST00000431547 RWDD3Q9Y3V2 267 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 TRIOBPQ9H2D6 2365 aa20.1■□□□□ 0.81
RFTN1-202ENST00000431547 PDXKO00764 312 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 POMCP01189 267 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 BMPR1AP36894 532 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 SCNN1GP51170 649 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 MORC3Q14149 939 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 SLC10A6Q3KNW5 377 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 ARMCX5Q6P1M9 558 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 C12orf56Q8IXR9 622 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 TMEM174Q8WUU8 243 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 RPS6KC1Q96S38 1066 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 PLEKHA5Q9HAU0 1116 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 MAPK8IP1Q9UQF2 711 aa20.09■□□□□ 0.81
RFTN1-202ENST00000431547 PTGESO14684 152 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 ADRB2P07550 413 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 TNFSF9P41273 254 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 PRCPP42785 496 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 RNASELQ05823 741 aaKnown RBP20.08■□□□□ 0.81
RFTN1-202ENST00000431547 GRIK3Q13003 919 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 ZBTB41Q5SVQ8 909 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 CRELD2Q6UXH1 353 aaPredicted RBP20.08■□□□□ 0.81
RFTN1-202ENST00000431547 SMYD4Q8IYR2 804 aaPredicted RBP20.08■□□□□ 0.81
RFTN1-202ENST00000431547 TRIML1Q8N9V2 468 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 SNX27Q96L92 541 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 C17orf80Q9BSJ5 609 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 TTYH1Q9H313 450 aaPredicted RBP20.08■□□□□ 0.81
RFTN1-202ENST00000431547 SEMA6BQ9H3T3 888 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 AAASQ9NRG9 546 aa20.08■□□□□ 0.81
RFTN1-202ENST00000431547 TTC26A0AVF1 554 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 MEFVO15553 781 aaPredicted RBP20.07■□□□□ 0.8
RFTN1-202ENST00000431547 EXTL3O43909 919 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 RB1P06400 928 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 THP07101 528 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 KCNE1P15382 129 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 LAG3P18627 525 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 PTMSP20962 102 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 BMP6P22004 513 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ACOT2P49753 483 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ENOX2Q16206 610 aaKnown RBP20.07■□□□□ 0.8
RFTN1-202ENST00000431547 EPC2Q52LR7 807 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 SPOUT1Q5T280 376 aaKnown RBP20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ZNF697Q5TEC3 545 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ISM2Q6H9L7 571 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 SPRED2Q7Z698 418 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ZNF280BQ86YH2 543 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 ADSSL1Q8N142 457 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 PLVAPQ9BX97 442 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 CXCL16Q9H2A7 254 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 PCIF1Q9H4Z3 704 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 NRDE2Q9H7Z3 1164 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 RPF1Q9H9Y2 349 aaKnown RBP20.07■□□□□ 0.8
RFTN1-202ENST00000431547 KIAA1586Q9HCI6 787 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 HSPBP1Q9NZL4 362 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 CNTN3Q9P232 1028 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 HCSTQ9UBK5 93 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 TRAF3IP3Q9Y228 551 aa20.07■□□□□ 0.8
RFTN1-202ENST00000431547 SMIM28A0A1B0GU29 152 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 CARNS1A5YM72 827 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 C5orf67F2Z3F1 127 aa20.06■□□□□ 0.8
RFTN1-202ENST00000431547 BIN1O00499 593 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms