RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SLC39A4Q6P5W5 647 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 Q7L0L9 218 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 NELFCDQ8IXH7 590 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 ZFP42Q96MM3 310 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 GBP3Q9H0R5 595 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 TBC1D13Q9NVG8 400 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 PCDHB12Q9Y5F1 795 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 ZMYM2Q9UBW7 1377 aa27.74■■■□□ 2.03
TSPAN3-203ENST00000424443 OGTO15294 1046 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 KIF20AO95235 890 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 LAG3P18627 525 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 SCNN1GP51170 649 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 FBXO22Q8NEZ5 403 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 SCFD1Q8WVM8 642 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 GSDMAQ96QA5 445 aa27.73■■■□□ 2.03
TSPAN3-203ENST00000424443 A0A0B4J269 797 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 TISP43B9A030 160 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 BMPR1AP36894 532 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 EPC2Q52LR7 807 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 LRRC55Q6ZSA7 311 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 SPRED2Q7Z698 418 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 HAPLN2Q9GZV7 340 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 IKZF4Q9H2S9 585 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 CWH43Q9H720 699 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 AGO2Q9UKV8 859 aaKnown RBP27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 PCDHA5Q9Y5H7 936 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 STYXL1Q9Y6J8 313 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 ZC3H11AO75152 810 aaKnown RBP eCLIP27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 SEZ6Q53EL9 994 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 KIAA0895Q8NCT3 520 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 ERCC4Q92889 916 aaPredicted RBP27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 HCSTQ9UBK5 93 aa27.72■■■□□ 2.03
TSPAN3-203ENST00000424443 INPPL1O15357 1258 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 RB1P06400 928 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 CLTAP09496 248 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 ALDH7A1P49419 539 aaKnown RBP27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 AFF1P51825 1210 aaKnown RBP27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 GRIN2CQ14957 1233 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 KNOP1Q1ED39 458 aaKnown RBP27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 BMT2Q1RMZ1 405 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 ARMCX5Q6P1M9 558 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 HS2ST1Q7LGA3 356 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 ZNF558Q96NG5 402 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 PLVAPQ9BX97 442 aa27.71■■■□□ 2.03
TSPAN3-203ENST00000424443 NLRC5Q86WI3 1866 aa27.7■■■□□ 2.03
TSPAN3-203ENST00000424443 CARNS1A5YM72 827 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 GARTP22102 1010 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 GRIK3Q13003 919 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 COLGALT1Q8NBJ5 622 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 GTPBP4Q9BZE4 634 aaKnown RBP27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 PRDM12Q9H4Q4 367 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 RALGAPA2Q2PPJ7 1873 aa27.7■■■□□ 2.02
TSPAN3-203ENST00000424443 LDHAP00338 332 aaKnown RBP27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 THP07101 528 aa27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 CAMK4Q16566 473 aa27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 KCNT2Q6UVM3 1135 aa27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 NOC3LQ8WTT2 800 aaKnown RBP27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 C11orf84Q9BUA3 381 aaPredicted RBP27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 NRDE2Q9H7Z3 1164 aa27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 RPF1Q9H9Y2 349 aaKnown RBP27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 MIOSQ9NXC5 875 aa27.69■■■□□ 2.02
TSPAN3-203ENST00000424443 LINC00271P0C7V0 271 aa27.68■■■□□ 2.02
TSPAN3-203ENST00000424443 ADSSP30520 456 aa27.68■■■□□ 2.02
TSPAN3-203ENST00000424443 SNRPFP62306 86 aaKnown RBP27.68■■■□□ 2.02
TSPAN3-203ENST00000424443 GAS2L1Q99501 681 aaPredicted RBP27.68■■■□□ 2.02
TSPAN3-203ENST00000424443 CGNQ9P2M7 1197 aaKnown RBP27.68■■■□□ 2.02
TSPAN3-203ENST00000424443 C5orf67F2Z3F1 127 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 HOXD13P35453 343 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 ACOT2P49753 483 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 BCAR1P56945 870 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 ZNF280BQ86YH2 543 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 SPATA20Q8TB22 786 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 GOLGA5Q8TBA6 731 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 SNX27Q96L92 541 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 PCIF1Q9H4Z3 704 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 TDRD15B5MCY1 1934 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 KIAA0391O15091 583 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 DDHD2O94830 711 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 ALDH2P05091 517 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 CXCL8P10145 99 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 PPM1AP35813 382 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 TNFSF9P41273 254 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 PPP2R3AQ06190 1150 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 GPM6BQ13491 265 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 ZNF658Q5TYW1 1059 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 GSTCDQ8NEC7 633 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 P2RX5Q93086 422 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 FAM212AQ96EL1 285 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 CBWD1Q9BRT8 395 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 PLEKHA5Q9HAU0 1116 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 MAPK8IP1Q9UQF2 711 aa27.67■■■□□ 2.02
TSPAN3-203ENST00000424443 KIAA1671Q9BY89 1806 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 CHD9Q3L8U1 2897 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 SZT2Q5T011 3432 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 CITO14578 2027 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 H3BNC9 293 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 TULP1O00294 542 aaPredicted RBP27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 PTGESO14684 152 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 SLC10A6Q3KNW5 377 aa27.66■■■□□ 2.02
TSPAN3-203ENST00000424443 GLRA4Q5JXX5 417 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms