RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 CWH43Q9H720 699 aa23.69■■□□□ 1.38
SEC22C-207ENST00000423701 TBC1D13Q9NVG8 400 aa23.69■■□□□ 1.38
SEC22C-207ENST00000423701 A0A0B4J269 797 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 GOLGA6L22H0YM25 854 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 SEZ6Q53EL9 994 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 GSTCDQ8NEC7 633 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 ARNTL2Q8WYA1 636 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 CCDC94Q9BW85 323 aaPredicted RBP23.68■■□□□ 1.38
SEC22C-207ENST00000423701 STYXL1Q9Y6J8 313 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 COL4A4P53420 1690 aaPredicted RBP23.68■■□□□ 1.38
SEC22C-207ENST00000423701 FAM189A1O60320 539 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 ADSSP30520 456 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 SCNN1GP51170 649 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 BMT2Q1RMZ1 405 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 EPC2Q52LR7 807 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 SLFN12LQ6IEE8 588 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 NELFCDQ8IXH7 590 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 DEFB123Q8N688 67 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 SPATA20Q8TB22 786 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 SAMD11Q96NU1 681 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 MSTO1Q9BUK6 570 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 RWDD3Q9Y3V2 267 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 PCDHA5Q9Y5H7 936 aa23.68■■□□□ 1.38
SEC22C-207ENST00000423701 EPOPA6NHQ4 379 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 POMCP01189 267 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 CTNNB1P35222 781 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 GRIN2CQ14957 1233 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 SPOUT1Q5T280 376 aaKnown RBP23.67■■□□□ 1.38
SEC22C-207ENST00000423701 CXCL16Q9H2A7 254 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 MIOSQ9NXC5 875 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 KANSL3Q9P2N6 904 aa23.67■■□□□ 1.38
SEC22C-207ENST00000423701 OGTO15294 1046 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 B4GALT3O60512 393 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 SMC2O95347 1197 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 RNASELQ05823 741 aaKnown RBP23.66■■□□□ 1.38
SEC22C-207ENST00000423701 ZBTB41Q5SVQ8 909 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 POMGNT1Q8WZA1 660 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 SMARCE1Q969G3 411 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 ACAP3Q96P50 834 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 GSDMAQ96QA5 445 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 RPS6KC1Q96S38 1066 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 GBP3Q9H0R5 595 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 TOPORSQ9NS56 1045 aaPredicted RBP23.66■■□□□ 1.38
SEC22C-207ENST00000423701 RMND1Q9NWS8 449 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 PLAGL2Q9UPG8 496 aa23.66■■□□□ 1.38
SEC22C-207ENST00000423701 TDRD15B5MCY1 1934 aaKnown RBP23.65■■□□□ 1.38
SEC22C-207ENST00000423701 PTGESO14684 152 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 LAG3P18627 525 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 BMPR1AP36894 532 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 TNFSF9P41273 254 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 YARSP54577 528 aaKnown RBP23.65■■□□□ 1.38
SEC22C-207ENST00000423701 ZNF280BQ86YH2 543 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 SNX27Q96L92 541 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 PRDM12Q9H4Q4 367 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 NRDE2Q9H7Z3 1164 aa23.65■■□□□ 1.38
SEC22C-207ENST00000423701 AGO2Q9UKV8 859 aaKnown RBP23.65■■□□□ 1.38
SEC22C-207ENST00000423701 C5orf67F2Z3F1 127 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 MEFVO15553 781 aaPredicted RBP23.64■■□□□ 1.38
SEC22C-207ENST00000423701 TGFB1I1O43294 461 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 DDHD2O94830 711 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 PBX3P40426 434 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 GRIK3Q13003 919 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 COLGALT1Q8NBJ5 622 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 FBXO22Q8NEZ5 403 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 CBWD1Q9BRT8 395 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 AAASQ9NRG9 546 aa23.64■■□□□ 1.38
SEC22C-207ENST00000423701 ZC3H11AO75152 810 aaKnown RBP eCLIP23.63■■□□□ 1.37
SEC22C-207ENST00000423701 CLTAP09496 248 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 CXCL8P10145 99 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 GARTP22102 1010 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 KYAT1Q16773 422 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 KNOP1Q1ED39 458 aaKnown RBP23.63■■□□□ 1.37
SEC22C-207ENST00000423701 ARMCX5Q6P1M9 558 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 DNAJB4Q9UDY4 337 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 CPSF3Q9UKF6 684 aaKnown RBP23.63■■□□□ 1.37
SEC22C-207ENST00000423701 CITO14578 2027 aa23.63■■□□□ 1.37
SEC22C-207ENST00000423701 RFXAPO00287 272 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 DSC1Q08554 894 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 CAMK4Q16566 473 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 SLC10A6Q3KNW5 377 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 XKR4Q5GH76 650 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 GLRA4Q5JXX5 417 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 KCNT2Q6UVM3 1135 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 ALKAL1Q6UXT8 129 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 GPT2Q8TD30 523 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 GDPD5Q8WTR4 605 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 ZNF558Q96NG5 402 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 GUCD1Q96NT3 240 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 FAM193BQ96PV7 902 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-207ENST00000423701 PLVAPQ9BX97 442 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 AGPAT3Q9NRZ7 376 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 MTMR10Q9NXD2 777 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 PCDHB12Q9Y5F1 795 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 RB1P06400 928 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 ACOT2P49753 483 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 BCAR1P56945 870 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 ENOX2Q16206 610 aaKnown RBP23.62■■□□□ 1.37
SEC22C-207ENST00000423701 SMYD4Q8IYR2 804 aaPredicted RBP23.62■■□□□ 1.37
SEC22C-207ENST00000423701 SAAL1Q96ER3 474 aa23.62■■□□□ 1.37
SEC22C-207ENST00000423701 C11orf84Q9BUA3 381 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms