RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 SSNA1O43805 119 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CCND1P24385 295 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 MTFR1Q15390 333 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 ULK2Q8IYT8 1036 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC33Q8N5R6 958 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 GTF2A1LQ9UNN4 478 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 TMBIM6P55061 237 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 DYMQ7RTS9 669 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 NLRP12P59046 1061 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 GFPT1Q06210 699 aaPredicted RBP9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 PCDHGA4Q9Y5G9 962 aa9.03□□□□□ -0.96
CACNA1C-220ENST00000399655 HLA-DRAP01903 254 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 MAGEA6P43360 314 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 TAP1Q03518 808 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 RABGAP1LQ5R372 815 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 KIAA1841Q6NSI8 718 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 CYP4F22Q6NT55 531 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 EXT2Q93063 718 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 TCEANC2Q96MN5 208 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 RXRAP19793 462 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 THEMIS2Q5TEJ8 643 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 BICRALQ6AI39 1079 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 PHF8Q9UPP1 1060 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.96
CACNA1C-220ENST00000399655 PHLPP2Q6ZVD8 1323 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF18P17022 549 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 FGFR2P21802 821 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 HMOX2P30519 316 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ACAP2Q15057 778 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 LRRC6Q86X45 466 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 C1QTNF1Q9BXJ1 281 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 MTSS1O43312 755 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 MAPK4P31152 587 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 CRYMQ14894 314 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DDIASQ8IXT1 998 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF579Q8NAF0 562 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF285Q96NJ3 590 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 SLF1Q9BQI6 1058 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM36Q9NQ86 728 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ZNF624Q9P2J8 865 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 CLEC11AQ9Y240 323 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 MSH6P52701 1360 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 H2AFZP0C0S5 128 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PTGDRQ13258 359 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ZBTB6Q15916 424 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PGBD2Q6P3X8 592 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 H2AFVQ71UI9 128 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 NLRX1Q86UT6 975 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM49BA6NDI0 452 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 TRIM49D1C9J1S8 452 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 RPS8P62241 208 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PABPC4Q13310 644 aaKnown RBP eCLIP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 LRRC69Q6ZNQ3 347 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 KCNH5Q8NCM2 988 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DDHD2O94830 711 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 APOL3O95236 402 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 MYL12AP19105 171 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 SP4Q02446 784 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 SNX21Q969T3 373 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DBF4Q9UBU7 674 aaPredicted RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 EFR3BQ9Y2G0 817 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PIK3R4Q99570 1358 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DCKP27707 260 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ALDH3A2P51648 485 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 TCAIMQ8N3R3 496 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DPH5Q9H2P9 285 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PRKAG2Q9UGJ0 569 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 FAUP35544 74 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 SVOPQ8N4V2 548 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 CARTPTQ16568 116 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ANO7Q6IWH7 933 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 TTC6Q86TZ1 520 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 EXOC3L1Q86VI1 746 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ARMT1Q9H993 441 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 DYRK4Q9NR20 520 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 KLC4Q9NSK0 619 aa9.02□□□□□ -0.97
CACNA1C-220ENST00000399655 ANKRD44Q8N8A2 993 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 STX16-NPEPL1H3BU86 382 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 STX16O14662 325 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 UQCRBP14927 111 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SURF1Q15526 300 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ITPRIPL1Q6GPH6 555 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 C17orf50Q8WW18 174 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 CKAP2Q8WWK9 683 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 DDX50Q9BQ39 737 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 NYXQ9GZU5 481 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 ASB14A6NK59 587 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 FKBP9O95302 570 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 POLR2EP19388 210 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 FKBP9P1Q75LS8 142 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 METTL13Q8N6R0 699 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 DDX54Q8TDD1 881 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 NFE2L3Q9Y4A8 694 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 SOGA1O94964 1423 aa9.01□□□□□ -0.97
CACNA1C-220ENST00000399655 GAS7O60861 476 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms