RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 CYTH2Q99418 400 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 COG4Q9H9E3 785 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 OLA1Q9NTK5 396 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 TSPOAP1O95153 1857 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 CYP2D7A0A087X1C5 515 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 C16orf96A6NNT2 1141 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 BCAR1P56945 870 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 CDK17Q00537 523 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 NSUN2Q08J23 767 aaKnown RBP eCLIP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 PI16Q6UXB8 463 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 PATL1Q86TB9 770 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 DAGLBQ8NCG7 672 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 AIFM3Q96NN9 605 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 EPAS1Q99814 870 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 VPS11Q9H270 941 aa8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 RBAKQ9NYW8 714 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 MTO1Q9Y2Z2 717 aaKnown RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 FARP1Q9Y4F1 1045 aaPredicted RBP8.84□□□□□ -0.99
SPTLC3-201ENST00000399002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.84□□□□□ -1
SPTLC3-201ENST00000399002 POTEB3A0JP26 581 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 POTECB2RU33 542 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 HSPA1AP0DMV8 641 aaKnown RBP8.84□□□□□ -1
SPTLC3-201ENST00000399002 HSPA1BP0DMV9 641 aaKnown RBP8.84□□□□□ -1
SPTLC3-201ENST00000399002 NNMTP40261 264 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 LRRC8BQ6P9F7 803 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 POTEBQ6S5H4 581 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 FASTKD5Q7L8L6 764 aaKnown RBP8.84□□□□□ -1
SPTLC3-201ENST00000399002 TEX2Q8IWB9 1127 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 ULK4Q96C45 1275 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 CEP95Q96GE4 821 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 MED15Q96RN5 788 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 PIM2Q9P1W9 311 aa8.84□□□□□ -1
SPTLC3-201ENST00000399002 TTC26A0AVF1 554 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 GSG1L2A8MUP6 293 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 SNRNP48Q6IEG0 339 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 TTC23LQ6PF05 361 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 ZNF555Q8NEP9 628 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 PIGOQ8TEQ8 1089 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 LPAR1Q92633 364 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 ARHGEF26Q96DR7 871 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 BTBD6Q96KE9 485 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 C11orf70Q9BRQ4 267 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 KATNAL1Q9BW62 490 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 MOV10L1Q9BXT6 1211 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 AGO2Q9UKV8 859 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 IQSEC2Q5JU85 1478 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L15C9J2P7 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L13C9JLJ4 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L11C9JVI0 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L18D6R9N7 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L22D6RA61 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L17D6RBQ6 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L19D6RCP7 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L20D6RJB6 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 ESRRBO95718 433 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 CYP19A1P11511 503 aaPredicted RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 USP17L24Q0WX57 530 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 OXER1Q8TDS5 423 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 FBXL5Q9UKA1 691 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 PCDHA10Q9Y5I2 948 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 SRGAP2O75044 1071 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 OSTNP61366 133 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 AP1B1Q10567 949 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 FLOT2Q14254 428 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 TTC39BQ5VTQ0 682 aaPredicted RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 ADSSL1Q8N142 457 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 RNPC3Q96LT9 517 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 RANBP17Q9H2T7 1088 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 RNF146Q9NTX7 359 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 HACD3Q9P035 362 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 ATP1A1P05023 1023 aaKnown RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 HOXD10P28358 340 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 MMP14P50281 582 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 NAB2Q15742 525 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 PPP6R3Q5H9R7 873 aaPredicted RBP8.83□□□□□ -1
SPTLC3-201ENST00000399002 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 C2orf69Q8N8R5 385 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 SPATA4Q8NEY3 305 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 CALML6Q8TD86 181 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 APBB2Q92870 758 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 KLC4Q9NSK0 619 aa8.83□□□□□ -1
SPTLC3-201ENST00000399002 DTNBO60941 627 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 YWHABP31946 246 aaKnown RBP8.82□□□□□ -1
SPTLC3-201ENST00000399002 KRT72Q14CN4 511 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 RAPGEF5Q92565 580 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 PAWRQ96IZ0 340 aaKnown RBP8.82□□□□□ -1
SPTLC3-201ENST00000399002 ZMAT2Q96NC0 199 aaKnown RBP8.82□□□□□ -1
SPTLC3-201ENST00000399002 PKD2L2Q9NZM6 624 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 GABBR1Q9UBS5 961 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 TUBE1Q9UJT0 475 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 EMSYQ7Z589 1322 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 MTSS1O43312 755 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 TMEM253P0C7T8 217 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 CDC25AP30304 524 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 RAD51Q06609 339 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 NR1I3Q14994 352 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 ABTB1Q969K4 478 aaPredicted RBP8.82□□□□□ -1
SPTLC3-201ENST00000399002 PLEKHA5Q9HAU0 1116 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 DIP2AQ14689 1571 aa8.82□□□□□ -1
SPTLC3-201ENST00000399002 EIF3HO15372 352 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms