RNA–Protein interactions for RNA: ENST00000398495.6

MBD1-209, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 2,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-209ENST00000398495 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 CCNI2Q6ZMN8 369 aaPredicted RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 PRPF31Q8WWY3 499 aaKnown RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 SLC10A4Q96EP9 437 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 PLXNA1Q9UIW2 1896 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 NOP56O00567 594 aaKnown RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 FTLP02792 175 aaPredicted RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 MMEP08473 750 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 SCP2P22307 547 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 CLDN10P78369 228 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 FMO1Q01740 532 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 SMC1AQ14683 1233 aaKnown RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 PLCB4Q15147 1175 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 C8orf74Q6P047 294 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 KCNV1Q6PIU1 500 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 SYCE1Q8N0S2 351 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 USP38Q8NB14 1042 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 SHCBP1Q8NEM2 672 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 ZBTB9Q96C00 473 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 PBKQ96KB5 322 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 SPATA33Q96N06 139 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 ISCUQ9H1K1 167 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 TMEM134Q9H6X4 195 aa16.47■□□□□ 0.23
MBD1-209ENST00000398495 SUCLA2Q9P2R7 463 aaPredicted RBP16.47■□□□□ 0.23
MBD1-209ENST00000398495 A0A0B4J269 797 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 H3BQF6 201 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
MBD1-209ENST00000398495 CALCAP01258 141 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 TDRD10Q5VZ19 366 aaKnown RBP16.46■□□□□ 0.23
MBD1-209ENST00000398495 LRRC71Q8N4P6 559 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 METTL13Q8N6R0 699 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 ATP8B4Q8TF62 1192 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 MSTO1Q9BUK6 570 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 RBAKQ9NYW8 714 aaPredicted RBP16.46■□□□□ 0.23
MBD1-209ENST00000398495 ADGRA2Q96PE1 1338 aa16.46■□□□□ 0.23
MBD1-209ENST00000398495 CEP104O60308 925 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 VNN1O95497 513 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 HLA-DRAP01903 254 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 HARSP12081 509 aaKnown RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 OAS2P29728 719 aaKnown RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 TNNT3P45378 269 aaPredicted RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 MAP9Q49MG5 647 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 SEZ6Q53EL9 994 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 SLFN12LQ6IEE8 588 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 TRAPPC12Q8WVT3 735 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 HES6Q96HZ4 224 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 FNBP1Q96RU3 617 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 CCDC113Q9H0I3 377 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 RTN2O75298 545 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 CYP11B1P15538 503 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 TNNI1P19237 187 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 PIK3CAP42336 1068 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 MKRN3Q13064 507 aaKnown RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 ZACNQ401N2 412 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 MAP1SQ66K74 1059 aaPredicted RBP16.45■□□□□ 0.22
MBD1-209ENST00000398495 PLPPR4Q7Z2D5 763 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 RUBCNQ92622 972 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 CGRRF1Q99675 332 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 STIM2Q9P246 746 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 AMFRQ9UKV5 643 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
MBD1-209ENST00000398495 IQCA1LA6NCM1 817 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 ATMINO43313 823 aaPredicted RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
MBD1-209ENST00000398495 PDE6CP51160 858 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 GABPB1Q06547 395 aaPredicted RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 LAMTOR4Q0VGL1 99 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 IER5Q5VY09 327 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 CDCA2Q69YH5 1023 aaPredicted RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 KRT12Q99456 494 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 C1orf112Q9NSG2 853 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 PNMA3Q9UL41 463 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 CNTNAP2Q9UHC6 1331 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 IGKV6-21A0A0C4DH24 114 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 DDX3YO15523 660 aaKnown RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 SRGAP2CP0DJJ0 459 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 KRT5P13647 590 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 CDR2Q01850 454 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 GCNT1Q02742 428 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 BIRC3Q13489 604 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 GLIPR1L2Q4G1C9 344 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 SPOPLQ6IQ16 392 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 ACTRT1Q8TDG2 376 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 DDX1Q92499 740 aaKnown RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 ZBTB10Q96DT7 871 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 CHORDC1Q9UHD1 332 aaPredicted RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 TMEM59LQ9UK28 342 aa16.44■□□□□ 0.22
MBD1-209ENST00000398495 NOC2LQ9Y3T9 749 aaKnown RBP16.44■□□□□ 0.22
MBD1-209ENST00000398495 ZC3H4Q9UPT8 1303 aaKnown RBP16.43■□□□□ 0.22
MBD1-209ENST00000398495 PDHXO00330 501 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms