RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 CLUL1Q15846 466 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 XKR3Q5GH77 459 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 ALS2CLQ60I27 953 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 ISCUQ9H1K1 167 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 CYP26B1Q9NR63 512 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 MAPK4P31152 587 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 PRKCEQ02156 737 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 DNAAF5Q86Y56 855 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 CBWD2Q8IUF1 395 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 SHCBP1Q8NEM2 672 aa23.23■■□□□ 1.31
TRIM54-202ENST00000380075 RNF40O75150 1001 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 GLI1P08151 1106 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 SUPT20HL2P0C7V6 817 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 GPC3P51654 580 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 STXBP2Q15833 593 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 TRMT1LQ7Z2T5 733 aaKnown RBP23.22■■□□□ 1.31
TRIM54-202ENST00000380075 GPR142Q7Z601 462 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 FAM71AQ8IYT1 594 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 GOLGA6L1Q8N7Z2 621 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 BSNDQ8WZ55 320 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 FAM81BQ96LP2 452 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 MROH8Q9H579 483 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 SEPT11Q9NVA2 429 aaKnown RBP23.22■■□□□ 1.31
TRIM54-202ENST00000380075 SEPT9Q9UHD8 586 aaPredicted RBP23.22■■□□□ 1.31
TRIM54-202ENST00000380075 ARID2Q68CP9 1835 aa23.22■■□□□ 1.31
TRIM54-202ENST00000380075 BUB1BO60566 1050 aaPredicted RBP23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GZMAP12544 262 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 CCDC60Q8IWA6 550 aaPredicted RBP23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GOLPH3Q9H4A6 298 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 KIAA1586Q9HCI6 787 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 EPB41L5Q9HCM4 733 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 ARHGAP28Q9P2N2 729 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 FBXO40Q9UH90 709 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 NOC2LQ9Y3T9 749 aaKnown RBP23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GOLGA8IPA6NC78 632 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GOLGA8JA6NMD2 632 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 TNPO2O14787 897 aaKnown RBP23.21■■□□□ 1.31
TRIM54-202ENST00000380075 KIAA0391O15091 583 aaKnown RBP23.21■■□□□ 1.31
TRIM54-202ENST00000380075 FCGRTP55899 365 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GUCY2DQ02846 1103 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 GPD1LQ8N335 351 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 ZSWIM2Q8NEG5 633 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 POMGNT1Q8WZA1 660 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 SHC3Q92529 594 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 XPNPEP1Q9NQW7 623 aa23.21■■□□□ 1.31
TRIM54-202ENST00000380075 RTN2O75298 545 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 ABCB4P21439 1286 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 CYP24A1Q07973 514 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 MREGQ8N565 214 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 FBXL13Q8NEE6 735 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 WHAMMQ8TF30 809 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 GDAP1L1Q96MZ0 367 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 NT5C1BQ96P26 610 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 KIFC3Q9BVG8 833 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 THAP2Q9H0W7 228 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 SLITRK6Q9H5Y7 841 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 OSGEPQ9NPF4 335 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 OPA1O60313 960 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 ATG7O95352 703 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 COPB2P35606 906 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 GGCXP38435 758 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 PPP2R5EQ16537 467 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 C11orf63Q6NUN7 778 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 SLC39A4Q6P5W5 647 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 ENOSF1Q7L5Y1 443 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 PLEKHH3Q7Z736 793 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 RPUSD2Q8IZ73 545 aaKnown RBP23.2■■□□□ 1.3
TRIM54-202ENST00000380075 SAAL1Q96ER3 474 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 NAP1L3Q99457 506 aaPredicted RBP23.2■■□□□ 1.3
TRIM54-202ENST00000380075 CARD9Q9H257 536 aa23.2■■□□□ 1.3
TRIM54-202ENST00000380075 KIAA1217Q5T5P2 1943 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 AGPSO00116 658 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 HNRNPDLO14979 420 aaKnown RBP23.19■■□□□ 1.3
TRIM54-202ENST00000380075 RAD51CO43502 376 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 ZC3H11AO75152 810 aaKnown RBP eCLIP23.19■■□□□ 1.3
TRIM54-202ENST00000380075 GYS2P54840 703 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 MRPS25P82663 173 aaKnown RBP23.19■■□□□ 1.3
TRIM54-202ENST00000380075 CUL1Q13616 776 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 PPM1KQ8N3J5 372 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 EPS8L1Q8TE68 723 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 POLR3FQ9H1D9 316 aaPredicted RBP23.19■■□□□ 1.3
TRIM54-202ENST00000380075 TAS2R14Q9NYV8 317 aa23.19■■□□□ 1.3
TRIM54-202ENST00000380075 WDR81Q562E7 1941 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 HSF2BPO75031 334 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 FTLP02792 175 aaPredicted RBP23.18■■□□□ 1.3
TRIM54-202ENST00000380075 RNASE9P60153 205 aaKnown RBP23.18■■□□□ 1.3
TRIM54-202ENST00000380075 GPC5P78333 572 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 MORC4Q8TE76 937 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 SLC20A1Q8WUM9 679 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 CCDC127Q96BQ5 260 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 ARHGEF26Q96DR7 871 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 KREMEN1Q96MU8 473 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 RAB20Q9NX57 234 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 NOCTQ9UK39 431 aaKnown RBP23.18■■□□□ 1.3
TRIM54-202ENST00000380075 MAFBQ9Y5Q3 323 aaPredicted RBP23.18■■□□□ 1.3
TRIM54-202ENST00000380075 IVNS1ABPQ9Y6Y0 642 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 ZSWIM8A7E2V4 1837 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 MIF4GDA9UHW6 222 aaKnown RBP23.18■■□□□ 1.3
TRIM54-202ENST00000380075 KRIT1O00522 736 aa23.18■■□□□ 1.3
TRIM54-202ENST00000380075 MTA2O94776 668 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms