RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TMEM59LQ9UK28 342 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 A0A1W2PQC6 194 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 MGEA5O60502 916 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 SERPINB2P05120 415 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 HOXD10P28358 340 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ACADVLP49748 655 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 TNNC1P63316 161 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 LRRC14Q15048 493 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 USP49Q70CQ1 688 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 PATL1Q86TB9 770 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ZNF507Q8TCN5 953 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 EPB41L4BQ9H329 900 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 AZI2Q9H6S1 392 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 TRIM17Q9Y577 477 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 MATN2O00339 956 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 LAD1O00515 517 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ATP5HO75947 161 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 T-ENOLP0DO92 83 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 AFMP43652 599 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 NOVP48745 357 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 TUFMP49411 452 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 TMED10P49755 219 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 HAND2P61296 217 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ITGA9Q13797 1035 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 SPIDRQ14159 915 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 IFIT1BQ5T764 474 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 METTL21CQ5VZV1 264 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 KRT40Q6A162 431 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 DSTYKQ6XUX3 929 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 NOSTRINQ8IVI9 506 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 ANKRD13CQ8N6S4 541 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 USP38Q8NB14 1042 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 DAGLBQ8NCG7 672 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 DGCR14Q96DF8 476 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC42Q96M95 316 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 MAK16Q9BXY0 300 aaKnown RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC68Q9H2F9 335 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 FBXO2Q9UK22 296 aaPredicted RBP7.98□□□□□ -1.13
CDKL5-201ENST00000379989 GIT1Q9Y2X7 761 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 UMODL1Q5DID0 1318 aa7.98□□□□□ -1.13
CDKL5-201ENST00000379989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 LGALS16A8MUM7 142 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 ADCY3O60266 1144 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 ACSBG2Q5FVE4 666 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 STYK1Q6J9G0 422 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 ERP27Q96DN0 273 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 GLT8D2Q9H1C3 349 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 DCP1AQ9NPI6 582 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 VPS54Q9P1Q0 977 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 KLHL14Q9P2G3 628 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 CTDP1Q9Y5B0 961 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TLDC2A0PJX2 215 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 IQCA1LA6NCM1 817 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 DAPK3O43293 454 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 BUB1O43683 1085 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 CYP2C9P11712 490 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 KCNA2P16389 499 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 PTPREP23469 700 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TKTP29401 623 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 GYG1P46976 350 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 KLK7P49862 253 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 NAA20P61599 178 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 MAP3K10Q02779 954 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 C11orf74Q86VG3 221 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 VSIG1Q86XK7 387 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 IRF2BP1Q8IU81 584 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 DTX3LQ8TDB6 740 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 STARD8Q92502 1023 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TXLNGYQ9BZA5 131 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 IRF2BPLQ9H1B7 796 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 STX8Q9UNK0 236 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 SSX2IPQ9Y2D8 614 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TMA7Q9Y2S6 64 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 HBS1LQ9Y450 684 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 ATP6V0A2Q9Y487 856 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TNKSO95271 1327 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 CCDC162PA2VCL2 907 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 RASA4BC9J798 803 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 TTI1O43156 1089 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 RASA4O43374 803 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 MARK3P27448 753 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 CTDSPL2Q05D32 466 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 ARL6IP4Q66PJ3 421 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 LMBRD2Q68DH5 695 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 OTUD6AQ7L8S5 288 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 NAP1L4Q99733 375 aaKnown RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 FAM217BQ9NTX9 383 aaPredicted RBP7.97□□□□□ -1.13
CDKL5-201ENST00000379989 SELENONQ9NZV5 590 aa7.97□□□□□ -1.13
CDKL5-201ENST00000379989 A0A087X0B3 334 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 POLRMTO00411 1230 aaKnown RBP7.96□□□□□ -1.13
CDKL5-201ENST00000379989 STRNO43815 780 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 ZNF862O60290 1169 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 CBFA2T3O75081 653 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 PSMG1O95456 288 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 PPIDQ08752 370 aaKnown RBP7.96□□□□□ -1.13
CDKL5-201ENST00000379989 ACVR2BQ13705 512 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 KCTD21Q4G0X4 260 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms