RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 CYP39A1Q9NYL5 469 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SMIM23A6NLE4 172 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 HPDP32754 393 aaPredicted RBP18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SEL1L2Q5TEA6 688 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 FBXL13Q8NEE6 735 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 BTBD6Q96KE9 485 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 MAP3K20Q9NYL2 800 aaKnown RBP18.32■□□□□ 0.52
VEGFA-205ENST00000372067 UTP11Q9Y3A2 253 aaKnown RBP18.32■□□□□ 0.52
VEGFA-205ENST00000372067 RPS6KA3P51812 740 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SLC47A2Q86VL8 602 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SLC17A8Q8NDX2 589 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 ARMC2Q8NEN0 867 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 ANKRD62A6NC57 917 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 EBAG9O00559 213 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 FAM153BP0C7A2 387 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 TMEM253P0C7T8 217 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 MKRN4PQ13434 485 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-205ENST00000372067 FAM153CQ494X1 144 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 C2CD6Q53TS8 623 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 TLDC1Q6P9B6 456 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 EMBQ6PCB8 327 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GPD1LQ8N335 351 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 TMEM161BQ8NDZ6 487 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 CASKIN2Q8WXE0 1202 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 PPP1R16BQ96T49 567 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GINM1Q9NU53 330 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 FAM153AQ9UHL3 310 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 PEX19P40855 299 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GPC5P78333 572 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GTF2BQ00403 316 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 EMC2Q15006 297 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GLE1Q53GS7 698 aaKnown RBP18.31■□□□□ 0.52
VEGFA-205ENST00000372067 CEP85LQ5SZL2 805 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 DNAJC14Q6Y2X3 702 aaPredicted RBP18.31■□□□□ 0.52
VEGFA-205ENST00000372067 FAM228AQ86W67 206 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 PASD1Q8IV76 773 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 USTQ9Y2C2 406 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 ZC3H4Q9UPT8 1303 aaKnown RBP18.31■□□□□ 0.52
VEGFA-205ENST00000372067 IGSF9BQ9UPX0 1349 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 ADM5C9JUS6 153 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 MMEP08473 750 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 OSTNP61366 133 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
VEGFA-205ENST00000372067 GREB1LQ9C091 1923 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 TTI1O43156 1089 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 GCKP35557 465 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 XKR3Q5GH77 459 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 KLRG1Q96E93 195 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 INPP4AQ96PE3 977 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 ZNF214Q9UL59 606 aaPredicted RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 MYH11P35749 1972 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 DAPK3O43293 454 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 POTEJP0CG39 1038 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 IRAK1P51617 712 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 IGBP1P78318 339 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 B3GNT9Q6UX72 402 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 SLC9A9Q8IVB4 645 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 CCDC50Q8IVM0 306 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 TSEN2Q8NCE0 465 aaKnown RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 RNPC3Q96LT9 517 aaKnown RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 SCLT1Q96NL6 688 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 MSTO1Q9BUK6 570 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
VEGFA-205ENST00000372067 GPRC5DQ9NZD1 345 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 RNF181Q9P0P0 153 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
VEGFA-205ENST00000372067 SPDYE16A6NNV3 312 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 CLNS1AP54105 237 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 CCDC25Q86WR0 208 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 UHMK1Q8TAS1 419 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 PLEKHO2Q8TD55 490 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 TRIM51Q9BSJ1 452 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 TIPINQ9BVW5 301 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 IMPG2Q9BZV3 1241 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 SPATS2LQ9NUQ6 558 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 CPSF2Q9P2I0 782 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 PTPN22Q9Y2R2 807 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 ALG6Q9Y672 507 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 TLDC2A0PJX2 215 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 RDXP35241 583 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 MAP3K10Q02779 954 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 SV2AQ7L0J3 742 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 SEMA4DQ92854 862 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 NUP85Q9BW27 656 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 NRBP2Q9NSY0 501 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 FBXL5Q9UKA1 691 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 AGO2Q9UKV8 859 aaKnown RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 PCDHB4Q9Y5E5 795 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 PPP1R37O75864 691 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 KRT14P02533 472 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 PGK2P07205 417 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 ANXA13P27216 316 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 VGLL4Q14135 290 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 CDCA2Q69YH5 1023 aaPredicted RBP18.29■□□□□ 0.52
VEGFA-205ENST00000372067 MOB2Q70IA6 237 aa18.29■□□□□ 0.52
VEGFA-205ENST00000372067 RHOT2Q8IXI1 618 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms