RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SMYD2Q9NRG4 433 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 FUT2Q10981 343 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 COG2Q14746 738 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 IL17AQ16552 155 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 MUM1L1Q5H9M0 696 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 RNF149Q8NC42 400 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 HDAC7Q8WUI4 952 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 TEX13BQ9BXU2 312 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 GPRC5CQ9NQ84 441 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 DBR1Q9UK59 544 aaKnown RBP17.38■□□□□ 0.37
SCAF1-201ENST00000360565 INTUQ9ULD6 942 aa17.38■□□□□ 0.37
SCAF1-201ENST00000360565 TOM1L1O75674 476 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 HSD17B3P37058 310 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 CATSPER4Q7RTX7 472 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 PCGF5Q86SE9 256 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 TTC25Q96NG3 672 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 FAM118BQ9BPY3 351 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 PARVAQ9NVD7 372 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 ARSEP51690 589 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 GLIS3Q8NEA6 775 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 MAML1Q92585 1016 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 SPC25Q9HBM1 224 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
SCAF1-201ENST00000360565 KRT37O76014 449 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 GLI1P08151 1106 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 EN1Q05925 392 aaPredicted RBP17.37■□□□□ 0.37
SCAF1-201ENST00000360565 MEA1Q16626 185 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 CBWD1Q9BRT8 395 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 OSGEPQ9NPF4 335 aa17.37■□□□□ 0.37
SCAF1-201ENST00000360565 ZSCAN5CA6NGD5 496 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-201ENST00000360565 KLRC4O43908 158 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 KRT7P08729 469 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 CHN1P15882 459 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 STAT5BP51692 787 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 ITKQ08881 620 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 NR1H3Q13133 447 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 TLR10Q9BXR5 811 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 GGT7Q9UJ14 662 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 ABL1P00519 1130 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 ESRRAP11474 423 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-201ENST00000360565 SLC1A1P43005 524 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 RAPH1Q70E73 1250 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 TAAR1Q96RJ0 339 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 ASNSD1Q9NWL6 643 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 PCDHB2Q9Y5E7 798 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 SPAG7O75391 227 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 AGTP01019 485 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 CIITAP33076 1130 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 MKRN3Q13064 507 aaKnown RBP17.36■□□□□ 0.37
SCAF1-201ENST00000360565 SLC29A2Q14542 456 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 WDR72Q3MJ13 1102 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 PRAMEF18Q5VWM3 479 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 FBXW10Q5XX13 1052 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
SCAF1-201ENST00000360565 TMEM8AQ9HCN3 771 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 PEAK1Q9H792 1746 aa17.36■□□□□ 0.37
SCAF1-201ENST00000360565 M0QYV0 167 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 GCKP35557 465 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 EHD4Q9H223 541 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 HLA-DRAP01903 254 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 KYNUQ16719 465 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 CBWD2Q8IUF1 395 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 KLC2Q9H0B6 622 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 CACNA1FO60840 1977 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 P4HA2O15460 535 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 PHKA2P46019 1235 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 PRKCEQ02156 737 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 NCOA4Q13772 614 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 LRRC31Q6UY01 552 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 SPATA20Q8TB22 786 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 GMCL1Q96IK5 515 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 TRIM55Q9BYV6 548 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 PIK3C2AO00443 1686 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 TCP11X1B4DZS4 312 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 COPEO14579 308 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 FAM102AQ5T9C2 384 aaPredicted RBP17.35■□□□□ 0.37
SCAF1-201ENST00000360565 ZNF720Q7Z2F6 126 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 PPM1NQ8N819 430 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 RBBP8NLQ8NC74 664 aaPredicted RBP17.35■□□□□ 0.37
SCAF1-201ENST00000360565 ATG4CQ96DT6 458 aa17.35■□□□□ 0.37
SCAF1-201ENST00000360565 RBM15Q96T37 977 aaKnown RBP eCLIP17.35■□□□□ 0.372e-7■□□□□ 8.2
SCAF1-201ENST00000360565 PRMT1Q99873 361 aaKnown RBP17.35■□□□□ 0.37
SCAF1-201ENST00000360565 GMNNO75496 209 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 TMPRSS15P98073 1019 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 GABPAQ06546 454 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 ZNF507Q8TCN5 953 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 XPO6Q96QU8 1125 aaKnown RBP17.34■□□□□ 0.37
SCAF1-201ENST00000360565 TRAIPQ9BWF2 469 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 OSBPL8Q9BZF1 889 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 DCTN3O75935 186 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 TPD52P55327 224 aaPredicted RBP17.34■□□□□ 0.37
SCAF1-201ENST00000360565 TMEM119Q4V9L6 283 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 SIX6OS1Q8N1H7 587 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 MTMR9Q96QG7 549 aa17.34■□□□□ 0.37
SCAF1-201ENST00000360565 C2orf40Q9H1Z8 148 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms