RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 C1orf54Q8WWF1 131 aa17.34■□□□□ 0.37
SHTN1-202ENST00000355371 CHMP6Q96FZ7 201 aa17.34■□□□□ 0.37
SHTN1-202ENST00000355371 VPS11Q9H270 941 aa17.34■□□□□ 0.37
SHTN1-202ENST00000355371 DHX35Q9H5Z1 703 aaKnown RBP17.34■□□□□ 0.37
SHTN1-202ENST00000355371 VIPAS39Q9H9C1 493 aa17.34■□□□□ 0.37
SHTN1-202ENST00000355371 SENP1Q9P0U3 644 aa17.34■□□□□ 0.37
SHTN1-202ENST00000355371 APOL1O14791 398 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 STMN1P16949 149 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 CDH6P55285 790 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 NAB2Q15742 525 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 FAM47EQ6ZV65 393 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 TTC8Q8TAM2 541 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 CCDC124Q96CT7 223 aaKnown RBP17.33■□□□□ 0.37
SHTN1-202ENST00000355371 SMARCAD1Q9H4L7 1026 aa17.33■□□□□ 0.37
SHTN1-202ENST00000355371 NR3C2P08235 984 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 MAGEA9P43362 315 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 SNRNP35Q16560 246 aaKnown RBP17.33■□□□□ 0.36
SHTN1-202ENST00000355371 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 SEPT1Q8WYJ6 367 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 GRAMD1AQ96CP6 724 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 MXRA8Q9BRK3 442 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 SENP2Q9HC62 589 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 MRPL40Q9NQ50 206 aaKnown RBP17.33■□□□□ 0.36
SHTN1-202ENST00000355371 FXR1P51114 621 aaKnown RBP eCLIP17.33■□□□□ 0.36
SHTN1-202ENST00000355371 FGD4Q96M96 766 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 NLRP14Q86W24 1093 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 TC2NQ8N9U0 490 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 TRIM4Q9C037 500 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 LMCD1Q9NZU5 365 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 AMACRQ9UHK6 382 aa17.33■□□□□ 0.36
SHTN1-202ENST00000355371 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
SHTN1-202ENST00000355371 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SPATA31A7Q8IWB4 1347 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 HOXD10P28358 340 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 GALCP54803 685 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SGSM1Q2NKQ1 1148 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SYN2Q92777 582 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 C18orf8Q96DM3 657 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 PPP1R12AO14974 1030 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 RECQLP46063 649 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 RBP5P82980 135 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 FRA10AC1Q70Z53 315 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 ZNF526Q8TF50 670 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 FAF1Q9UNN5 650 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SNX2O60749 519 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 ARSEP51690 589 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 AP1B1Q10567 949 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 TADA2BQ86TJ2 420 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 GTF3C2Q8WUA4 911 aaPredicted RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 TGS1Q96RS0 853 aaKnown RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 LRRC1Q9BTT6 524 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 NOP53Q9NZM5 478 aaKnown RBP17.32■□□□□ 0.36
SHTN1-202ENST00000355371 TECPR2O15040 1411 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 PHF2O75151 1096 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SMIM24O75264 130 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 MYBP10242 640 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 KIF19Q2TAC6 998 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 ELMOD1Q8N336 334 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 EXT2Q93063 718 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 IL25Q9H293 177 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 AGPAT5Q9NUQ2 364 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 MAD2L2Q9UI95 211 aa17.32■□□□□ 0.36
SHTN1-202ENST00000355371 SPAG7O75391 227 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 HAUS5O94927 633 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 KRT80Q6KB66 452 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 POLR3CQ9BUI4 534 aaPredicted RBP17.31■□□□□ 0.36
SHTN1-202ENST00000355371 MAGEB2O15479 319 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 APOEP02649 317 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 VSNL1P62760 191 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 WDR72Q3MJ13 1102 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 RNF219Q5W0B1 726 aaPredicted RBP17.31■□□□□ 0.36
SHTN1-202ENST00000355371 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 NCAPHQ15003 741 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 EMC2Q15006 297 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 LRIG3Q6UXM1 1119 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 RASSF3Q86WH2 238 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 ENGASEQ8NFI3 743 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 RDM1Q8NG50 284 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 LRRC37BQ96QE4 947 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 MOV10L1Q9BXT6 1211 aaKnown RBP17.31■□□□□ 0.36
SHTN1-202ENST00000355371 PSMD14O00487 310 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 CDK17Q00537 523 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 ZNF668Q96K58 619 aaPredicted RBP17.31■□□□□ 0.36
SHTN1-202ENST00000355371 TAF6LQ9Y6J9 622 aa17.31■□□□□ 0.36
SHTN1-202ENST00000355371 AP3B1O00203 1094 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 PHEXP78562 749 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 EN1Q05925 392 aaPredicted RBP17.3■□□□□ 0.36
SHTN1-202ENST00000355371 NME3Q13232 169 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 HIF1AQ16665 826 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
SHTN1-202ENST00000355371 DNAJC8O75937 253 aaPredicted RBP17.3■□□□□ 0.36
SHTN1-202ENST00000355371 NCOA4Q13772 614 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 LMBRD2Q68DH5 695 aaPredicted RBP17.3■□□□□ 0.36
SHTN1-202ENST00000355371 OR6J1Q8NGC5 347 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 EPC1Q9H2F5 836 aa17.3■□□□□ 0.36
SHTN1-202ENST00000355371 IQGAP1P46940 1657 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms