RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 RWDD3Q9Y3V2 267 aa15.23■□□□□ 0.03
SEC13-202ENST00000350697 MRPL42Q9Y6G3 142 aaKnown RBP15.23■□□□□ 0.03
SEC13-202ENST00000350697 OGTO15294 1046 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 KIF20AO95235 890 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 GARTP22102 1010 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 ADSSP30520 456 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 OSTNP61366 133 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 KNOP1Q1ED39 458 aaKnown RBP15.22■□□□□ 0.03
SEC13-202ENST00000350697 NELFCDQ8IXH7 590 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 POMGNT1Q8WZA1 660 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 ZFP42Q96MM3 310 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 ACAP3Q96P50 834 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 RPS6KC1Q96S38 1066 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 TOPORSQ9NS56 1045 aaPredicted RBP15.22■□□□□ 0.03
SEC13-202ENST00000350697 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
SEC13-202ENST00000350697 CITO14578 2027 aa15.22■□□□□ 0.03
SEC13-202ENST00000350697 FAM189A1O60320 539 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 CLTAP09496 248 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 MCM4P33991 863 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 SCNN1GP51170 649 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 AFF1P51825 1210 aaKnown RBP15.21■□□□□ 0.03
SEC13-202ENST00000350697 ERVK-21P61565 698 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 SNRPFP62306 86 aaKnown RBP15.21■□□□□ 0.03
SEC13-202ENST00000350697 RNASELQ05823 741 aaKnown RBP15.21■□□□□ 0.03
SEC13-202ENST00000350697 CAMK4Q16566 473 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 LRRC55Q6ZSA7 311 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 HS2ST1Q7LGA3 356 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 NLRC5Q86WI3 1866 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 TMEM192Q8IY95 271 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 GPT2Q8TD30 523 aa15.21■□□□□ 0.03
SEC13-202ENST00000350697 TTYH1Q9H313 450 aaPredicted RBP15.21■□□□□ 0.03
SEC13-202ENST00000350697 CGNQ9P2M7 1197 aaKnown RBP15.21■□□□□ 0.03
SEC13-202ENST00000350697 RALGAPA2Q2PPJ7 1873 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 KIAA0391O15091 583 aaKnown RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 TGFB1I1O43294 461 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 MBD3O95983 291 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 LDHAP00338 332 aaKnown RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 POMCP01189 267 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 LAG3P18627 525 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 SEZ6Q53EL9 994 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 SPOUT1Q5T280 376 aaKnown RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 ZNF658Q5TYW1 1059 aaPredicted RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 ARMCX5Q6P1M9 558 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 SPRED2Q7Z698 418 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 GUF1Q8N442 669 aaKnown RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 GSTCDQ8NEC7 633 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 GOLGA5Q8TBA6 731 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 C17orf80Q9BSJ5 609 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 NUP62CLQ9H1M0 184 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 CWH43Q9H720 699 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 AAASQ9NRG9 546 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 HCSTQ9UBK5 93 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 TDRD15B5MCY1 1934 aaKnown RBP15.2■□□□□ 0.02
SEC13-202ENST00000350697 TRIP11Q15643 1979 aa15.2■□□□□ 0.02
SEC13-202ENST00000350697 CARNS1A5YM72 827 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 CTNNB1P35222 781 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 BMPR1AP36894 532 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 TNFSF9P41273 254 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 GRIK3Q13003 919 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 COBLL1Q53SF7 1204 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 XKR4Q5GH76 650 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 ALKAL1Q6UXT8 129 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 SNX27Q96L92 541 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 FAM193BQ96PV7 902 aaPredicted RBP15.19■□□□□ 0.02
SEC13-202ENST00000350697 CBWD1Q9BRT8 395 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 PLEKHA5Q9HAU0 1116 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 KIAA1468Q9P260 1216 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 CPSF3Q9UKF6 684 aaKnown RBP15.19■□□□□ 0.02
SEC13-202ENST00000350697 MAN1B1Q9UKM7 699 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 MTUS1Q9ULD2 1270 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 PCDHB12Q9Y5F1 795 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 KIAA1671Q9BY89 1806 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 CHD7Q9P2D1 2997 aa15.19■□□□□ 0.02
SEC13-202ENST00000350697 PDXKO00764 312 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 PTGESO14684 152 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 ZC3H11AO75152 810 aaKnown RBP eCLIP15.18■□□□□ 0.02
SEC13-202ENST00000350697 RB1P06400 928 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 THP07101 528 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 CXCL8P10145 99 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 ACOT2P49753 483 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 POU5F1Q01860 360 aaKnown RBP15.18■□□□□ 0.02
SEC13-202ENST00000350697 ENOX2Q16206 610 aaKnown RBP15.18■□□□□ 0.02
SEC13-202ENST00000350697 SLC10A6Q3KNW5 377 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 ZBTB41Q5SVQ8 909 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 ZNF280BQ86YH2 543 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 C12orf56Q8IXR9 622 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 SMYD4Q8IYR2 804 aaPredicted RBP15.18■□□□□ 0.02
SEC13-202ENST00000350697 COLGALT1Q8NBJ5 622 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
SEC13-202ENST00000350697 ZNF558Q96NG5 402 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms