RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 FLCNQ8NFG4 579 aa15.5■□□□□ 0.07
TPM1-202ENST00000288398 SH2B1Q9NRF2 756 aaPredicted RBP15.5■□□□□ 0.07
TPM1-202ENST00000288398 DAXXQ9UER7 740 aaPredicted RBP15.5■□□□□ 0.07
TPM1-202ENST00000288398 WDFY4Q6ZS81 3184 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 CASTOR2A6NHX0 329 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 F8W810 466 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 H0Y858 1186 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 GALR2O43603 387 aaPredicted RBP15.49■□□□□ 0.07
TPM1-202ENST00000288398 C1RP00736 705 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 THP07101 528 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 ELAVL2Q12926 359 aaKnown RBP15.49■□□□□ 0.07
TPM1-202ENST00000288398 FAM187BQ17R55 369 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 DCAF4L1Q3SXM0 396 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 PDXDC1Q6P996 788 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 CEP57Q86XR8 500 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 NOSTRINQ8IVI9 506 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 RNF168Q8IYW5 571 aaPredicted RBP15.49■□□□□ 0.07
TPM1-202ENST00000288398 KIFAP3Q92845 792 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 GPR62Q9BZJ7 368 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 SMOC2Q9H3U7 446 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 FZD8Q9H461 694 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 PDZD7Q9H5P4 517 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 WDR6Q9NNW5 1121 aaKnown RBP15.49■□□□□ 0.07
TPM1-202ENST00000288398 CHST7Q9NS84 486 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 ZDHHC7Q9NXF8 308 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 FNIP2Q9P278 1114 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 LRWD1Q9UFC0 647 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 KIF3AQ9Y496 699 aa15.49■□□□□ 0.07
TPM1-202ENST00000288398 ACKR2O00590 384 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 RFPL2O75678 378 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 CLCN5P51795 746 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 FBXO18Q8NFZ0 1043 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 HASPINQ8TF76 798 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 RABGGTAQ92696 567 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 PHOX2BQ99453 314 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 TTPALQ9BTX7 342 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 RHOBTB2Q9BYZ6 727 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 DUSP12Q9UNI6 340 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 TDRD15B5MCY1 1934 aaKnown RBP15.48■□□□□ 0.07
TPM1-202ENST00000288398 KMT2EQ8IZD2 1858 aa15.48■□□□□ 0.07
TPM1-202ENST00000288398 TGM5O43548 720 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 GFRA3O60609 400 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 RECQL4O94761 1208 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 YARSP54577 528 aaKnown RBP15.47■□□□□ 0.07
TPM1-202ENST00000288398 ST3GAL1Q11201 340 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 FAM171A1Q5VUB5 890 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 GET4Q7L5D6 327 aaPredicted RBP15.47■□□□□ 0.07
TPM1-202ENST00000288398 SIX5Q8N196 739 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 SNX29Q8TEQ0 813 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 NXPE3Q969Y0 559 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 BHMT2Q9H2M3 363 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.47■□□□□ 0.07
TPM1-202ENST00000288398 KIAA1024Q9UPX6 916 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
TPM1-202ENST00000288398 PHLPP2Q6ZVD8 1323 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 CCDC169A6NNP5 214 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 K7ERI5 159 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 ST18O60284 1047 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 KIF4AO95239 1232 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
TPM1-202ENST00000288398 FXR2P51116 673 aaKnown RBP eCLIP15.46■□□□□ 0.07
TPM1-202ENST00000288398 PSMD5Q16401 504 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 ATF7IP2Q5U623 682 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 KRT79Q5XKE5 535 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 PRSS55Q6UWB4 352 aaPredicted RBP15.46■□□□□ 0.07
TPM1-202ENST00000288398 TMEM105Q8N8V8 129 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 BSNDQ8WZ55 320 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 RTP3Q9BQQ7 232 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 PRKD2Q9BZL6 878 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 NT5C3AQ9H0P0 336 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 TOPORSQ9NS56 1045 aaPredicted RBP15.46■□□□□ 0.07
TPM1-202ENST00000288398 DDX19AQ9NUU7 478 aaKnown RBP15.46■□□□□ 0.07
TPM1-202ENST00000288398 DNM3Q9UQ16 869 aa15.46■□□□□ 0.07
TPM1-202ENST00000288398 TRAPPC3O43617 180 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 XYLBO75191 536 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 ZMYND10O75800 440 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 SEC24BO95487 1268 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 EFEMP2O95967 443 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 DMP1Q13316 513 aaPredicted RBP15.45■□□□□ 0.06
TPM1-202ENST00000288398 RTP2Q5QGT7 225 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 PPM1LQ5SGD2 360 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 FEZF2Q8TBJ5 459 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 PIK3R5Q8WYR1 880 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 UROC1Q96N76 676 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 KIFC3Q9BVG8 833 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 CCDC94Q9BW85 323 aaPredicted RBP15.45■□□□□ 0.06
TPM1-202ENST00000288398 CCDC113Q9H0I3 377 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 EPS15L1Q9UBC2 864 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 CACNG4Q9UBN1 327 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 POLIQ9UNA4 740 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 DENND4AQ7Z401 1863 aa15.45■□□□□ 0.06
TPM1-202ENST00000288398 LAD1O00515 517 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 CFHP08603 1231 aa15.44■□□□□ 0.06
TPM1-202ENST00000288398 HNRNPA1P09651 372 aaKnown RBP eCLIP15.44■□□□□ 0.06
TPM1-202ENST00000288398 FSHRP23945 695 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms