RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 MAPK8IP1Q9UQF2 711 aa13.95□□□□□ -0.18
SS18-202ENST00000269138 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
SS18-202ENST00000269138 STYXL1Q9Y6J8 313 aa13.95□□□□□ -0.18
SS18-202ENST00000269138 FAM189A1O60320 539 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 B4GALT3O60512 393 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 POMCP01189 267 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 TNFSF9P41273 254 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 SCNN1GP51170 649 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 ZNF280BQ86YH2 543 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 POMGNT1Q8WZA1 660 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 FAM161BQ96MY7 647 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 GSDMAQ96QA5 445 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 CBWD1Q9BRT8 395 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
SS18-202ENST00000269138 SEMA6BQ9H3T3 888 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 CLSTN2Q9H4D0 955 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 PCIF1Q9H4Z3 704 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 UBN1Q9NPG3 1134 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 TBC1D13Q9NVG8 400 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 PLAGL2Q9UPG8 496 aa13.94□□□□□ -0.18
SS18-202ENST00000269138 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 PTGESO14684 152 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 OGTO15294 1046 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 INPPL1O15357 1258 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 ERVK-21P61565 698 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 KNOP1Q1ED39 458 aaKnown RBP13.93□□□□□ -0.18
SS18-202ENST00000269138 SLC10A6Q3KNW5 377 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 SLFN12LQ6IEE8 588 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 LRRC43Q8N309 656 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
SS18-202ENST00000269138 ACAP3Q96P50 834 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 TGS1Q96RS0 853 aaKnown RBP13.93□□□□□ -0.18
SS18-202ENST00000269138 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 AGO2Q9UKV8 859 aaKnown RBP13.93□□□□□ -0.18
SS18-202ENST00000269138 UBE4BO95155 1302 aa13.93□□□□□ -0.18
SS18-202ENST00000269138 GOLGA8IPA6NC78 632 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 GOLGA8JA6NMD2 632 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 RFXAPO00287 272 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 BIN1O00499 593 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 CLIC2O15247 247 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 DDHD2O94830 711 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 PBX3P40426 434 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 ACOT2P49753 483 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 GRIN2CQ14957 1233 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 SPOUT1Q5T280 376 aaKnown RBP13.92□□□□□ -0.18
SS18-202ENST00000269138 ZNF697Q5TEC3 545 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 CRELD2Q6UXH1 353 aaPredicted RBP13.92□□□□□ -0.18
SS18-202ENST00000269138 ALKAL1Q6UXT8 129 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 SAAL1Q96ER3 474 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 KCTD10Q9H3F6 313 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 AGPAT3Q9NRZ7 376 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 RMND1Q9NWS8 449 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 DNAJB4Q9UDY4 337 aa13.92□□□□□ -0.18
SS18-202ENST00000269138 FNDC1Q4ZHG4 1894 aaPredicted RBP13.92□□□□□ -0.18
SS18-202ENST00000269138 CLTAP09496 248 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 CXCL8P10145 99 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 BMP6P22004 513 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 GARTP22102 1010 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 CTNNB1P35222 781 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 BMPR1AP36894 532 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 YARSP54577 528 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 RNASELQ05823 741 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 ENOX2Q16206 610 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 GLRA4Q5JXX5 417 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 ZNF658Q5TYW1 1059 aaPredicted RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 ARMCX5Q6P1M9 558 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 SNX27Q96L92 541 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 ZMAT2Q96NC0 199 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 CACNG4Q9UBN1 327 aa13.91□□□□□ -0.18
SS18-202ENST00000269138 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
SS18-202ENST00000269138 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 SMIM28A0A1B0GU29 152 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 LACTBL1A8MY62 500 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 NT5C1B-RDH14C9J2C7 533 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 PRCPP42785 496 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 SPAG1Q07617 926 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 MORC3Q14149 939 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 XKR4Q5GH76 650 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 GPR153Q6NV75 609 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 TMEM130Q8N3G9 435 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 GUF1Q8N442 669 aaKnown RBP13.9□□□□□ -0.18
SS18-202ENST00000269138 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
SS18-202ENST00000269138 RPS6KC1Q96S38 1066 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 FAM213AQ9BRX8 229 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 NUP62CLQ9H1M0 184 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 PRDM12Q9H4Q4 367 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 HSPBP1Q9NZL4 362 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
SS18-202ENST00000269138 TTC26A0AVF1 554 aa13.9□□□□□ -0.19
SS18-202ENST00000269138 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.19
SS18-202ENST00000269138 CD44P16070 742 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms