RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 FAM200BP0CF97 657 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 SERPINB3P29508 390 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PMS1P54277 932 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MIGA2Q7L4E1 593 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 NT5DC3Q86UY8 548 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 IRF2BP1Q8IU81 584 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PPM1KQ8N3J5 372 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TERB1Q8NA31 727 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 RNF217Q8TC41 542 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 FBXO25Q8TCJ0 367 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 NUP85Q9BW27 656 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 POLD4Q9HCU8 107 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ARHGEF3Q9NR81 526 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ABCF3Q9NUQ8 709 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TBC1D23Q9NUY8 699 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 CNOT8Q9UFF9 292 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 SGK1O00141 431 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 GZMAP12544 262 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MAGEA4P43358 317 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MXI1P50539 228 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 RPS8P62241 208 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 AP1B1Q10567 949 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PABPC4Q13310 644 aaKnown RBP eCLIP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MYBPC2Q14324 1141 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 QPCTQ16769 361 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ODR4Q5SWX8 454 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT80Q6KB66 452 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 LRRC74BQ6ZQY2 392 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ERICH1Q86X53 443 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TMPRSS6Q8IU80 811 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PASD1Q8IV76 773 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TPH2Q8IWU9 490 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 KIRREL3Q8IZU9 778 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 CEP70Q8NHQ1 597 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 EPS8L3Q8TE67 593 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TGFBRAP1Q8WUH2 860 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF184Q99676 751 aaPredicted RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 SIKE1Q9BRV8 207 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 FRMD8Q9BZ67 464 aaPredicted RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 DCP1AQ9NPI6 582 aaPredicted RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 KCND2Q9NZV8 630 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 GGT7Q9UJ14 662 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 HAO1Q9UJM8 370 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 SLIT3O75094 1523 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 FANCGO15287 622 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 LPXNO60711 386 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 GAS7O60861 476 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ABL1P00519 1130 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ABHD2P08910 425 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TARSP26639 723 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PSMC4P43686 418 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 GYG1P46976 350 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 CEBPAP49715 358 aaPredicted RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 STAT2P52630 851 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 RAB15P59190 212 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 YWHAGP61981 247 aaKnown RBP eCLIP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TMPRSS15P98073 1019 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TAP1Q03518 808 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 AUHQ13825 339 aaKnown RBP5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ACCSLQ4AC99 568 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 PRR16Q569H4 304 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 RCOR2Q8IZ40 523 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MAML1Q92585 1016 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 ACSBG1Q96GR2 724 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 CYTH2Q99418 400 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TTC1Q99614 292 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TMEM47Q9BQJ4 181 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 MANSC1Q9H8J5 431 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 SLC5A4Q9NY91 659 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 TRIM33Q9UPN9 1127 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 UTRNP46939 3433 aa5.33□□□□□ -1.56
HNRNPU-230ENST00000640657 NCANO14594 1321 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 TCRBV5S4A2TA0A5A2 114 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 NBPF26B4DH59 902 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 C6orf229H3BNL8 230 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 K7ENM7 598 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 RNF225M0QZC1 329 aaPredicted RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 OPLAHO14841 1288 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 SORBS3O60504 671 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF189O75820 626 aaPredicted RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 GJB6O95452 261 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 MCF2P10911 925 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 MARSP56192 900 aaKnown RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 KCNJ2P63252 427 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 KRT81Q14533 505 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 ZNF571Q7Z3V5 609 aaPredicted RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 SFR1Q86XK3 245 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 NBPF15Q8N660 670 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 SCG3Q8WXD2 468 aaKnown RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 EZH1Q92800 747 aaPredicted RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 L3MBTL3Q96JM7 780 aaPredicted RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 RBM15Q96T37 977 aaKnown RBP eCLIP5.32□□□□□ -1.565e-6■■□□□ 11.5
HNRNPU-230ENST00000640657 TRIM56Q9BRZ2 755 aaKnown RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 TEKT3Q9BXF9 490 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 AMNQ9BXJ7 453 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 CDC42EP4Q9H3Q1 356 aaKnown RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 MLXIPLQ9NP71 852 aa5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 SAP30BPQ9UHR5 308 aaKnown RBP5.32□□□□□ -1.56
HNRNPU-230ENST00000640657 SORCS3Q9UPU3 1222 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms