RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 WDR72Q3MJ13 1102 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 ANO5Q75V66 913 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 GPIHBP1Q8IV16 184 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 NELFCDQ8IXH7 590 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 ZBED8Q8IZ13 594 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 PIP4K2CQ8TBX8 421 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 GIPC3Q8TF64 312 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TNFRSF25Q93038 417 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 PHKBQ93100 1093 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 CDK5RAP3Q96JB5 506 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 SLITRK6Q9H5Y7 841 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 MTRF1LQ9UGC7 380 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TRIM64CA6NLI5 447 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TXNDC9O14530 226 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TIMM44O43615 452 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TXKP42681 527 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 CRKLP46109 303 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TUFMP49411 452 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 EIF2B2P49770 351 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 CCT8P50990 548 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 IFIT5Q13325 482 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 ADRM1Q16186 407 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 ZNF362Q5T0B9 420 aaPredicted RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 RBM44Q6ZP01 1051 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 C11orf74Q86VG3 221 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 PASD1Q8IV76 773 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 DIS3L2Q8IYB7 885 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 SIX5Q8N196 739 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 SKA1Q96BD8 255 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 UIMC1Q96RL1 719 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 NOC4LQ9BVI4 516 aaKnown RBP7.29□□□□□ -1.24
SCN1A-213ENST00000636759 NT5C3AQ9H0P0 336 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 USP40Q9NVE5 1235 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 NDE1Q9NXR1 346 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 PLAGL2Q9UPG8 496 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 DOLKQ9UPQ8 538 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 TRAF3IP3Q9Y228 551 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 KIF13BQ9NQT8 1826 aa7.29□□□□□ -1.24
SCN1A-213ENST00000636759 MYH7BA7E2Y1 1941 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 BTBD18B2RXH4 712 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 IRS4O14654 1257 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CPA3P15088 417 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ENDOUP21128 410 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ACVR2BQ13705 512 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 LPIN1Q14693 890 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CERKLQ49MI3 558 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 NEPROQ6NW34 567 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 PPP1R21Q6ZMI0 780 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 OTUD6AQ7L8S5 288 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 MIER3Q7Z3K6 550 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ZNF280CQ8ND82 737 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 NRG4Q8WWG1 115 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 NACC2Q96BF6 587 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 STRBPQ96SI9 672 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 TPK1Q9H3S4 243 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 MMRN2Q9H8L6 949 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SATB2Q9UPW6 733 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 LOC102724428A0A0B4J2F2 783 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SPDYE16A6NNV3 312 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 GYG2O15488 501 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 TTI1O43156 1089 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 PJA2O43164 708 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 OR6B1O95007 311 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CBX6O95503 412 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 EYA4O95677 639 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 TKTP29401 623 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SIK1P57059 783 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CAMK2BQ13554 666 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SLC29A2Q14542 456 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 UBE3CQ15386 1083 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CYTH1Q15438 398 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ZNF658Q5TYW1 1059 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ARHGEF18Q6ZSZ5 1173 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 RRAGAQ7L523 313 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 RASSF3Q86WH2 238 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 MICU3Q86XE3 530 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 NCOA7Q8NI08 942 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ZNF507Q8TCN5 953 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ITPKCQ96DU7 683 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 NEUROD6Q96NK8 337 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ECSITQ9BQ95 431 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ARHGAP20Q9P2F6 1191 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 PRKAG3Q9UGI9 489 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ANGEL1Q9UNK9 670 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 FAM196BA6NMK8 535 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 CCDC22O60826 627 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 APOEP02649 317 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 EEF2P13639 858 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SLC1A4P43007 532 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 PLTPP55058 493 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SSRP1Q08945 709 aaKnown RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 ASPHQ12797 758 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 FOXD4Q12950 439 aaPredicted RBP7.28□□□□□ -1.24
SCN1A-213ENST00000636759 STRN3Q13033 797 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 MTFR1Q15390 333 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 VPS72Q15906 364 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 BCL2A1Q16548 175 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 SUSD4Q5VX71 490 aa7.28□□□□□ -1.24
SCN1A-213ENST00000636759 BTNL9Q6UXG8 535 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms