RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 LGALS2P05162 132 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZSCAN20P17040 1043 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 SMPD1P17405 629 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CDK17Q00537 523 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 BEX3Q00994 111 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ARHGAP1Q07960 439 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ALCAMQ13740 583 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TARBP2Q15633 366 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 ZNF792Q3KQV3 632 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 BRDTQ58F21 947 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 EEF1DP3Q658K8 133 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 KRT39Q6A163 491 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PLEKHH3Q7Z736 793 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SLC47A2Q86VL8 602 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 TMEM192Q8IY95 271 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SLC30A5Q8TAD4 765 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 ATP8B4Q8TF62 1192 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CPB2Q96IY4 423 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 MAML3Q96JK9 1138 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 KREMEN1Q96MU8 473 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CEP89Q96ST8 783 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 PARK7Q99497 189 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 FDXACB1Q9BRP7 624 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 NIFKQ9BYG3 293 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 STK33Q9BYT3 514 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 EDEM3Q9BZQ6 932 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 GPR88Q9GZN0 384 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 OSGEPQ9NPF4 335 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 SETD4Q9NVD3 440 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 RBAKQ9NYW8 714 aaPredicted RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 PTPRFP10586 1907 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 UBE4BO95155 1302 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 RBBP6Q7Z6E9 1792 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 MYH9P35579 1960 aaKnown RBP3.72□□□□□ -1.81
LIG4-205ENST00000614526 MYH10P35580 1976 aa3.72□□□□□ -1.81
LIG4-205ENST00000614526 CTAGE15A4D2H0 777 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 H3BRB1 525 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 ADCY3O60266 1144 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TUBB4AP04350 444 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 PRKCBP05771 671 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 IQCF3P0C7M6 154 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 CTAGE8P0CG41 777 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 NAMPTP43490 491 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 GALCP54803 685 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 JAM2P57087 298 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 CBX1P83916 185 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TFAMQ00059 246 aaKnown RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 C2orf54Q08AI8 447 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 ACVR2BQ13705 512 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 CRELD2Q6UXH1 353 aaPredicted RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 SCARA5Q6ZMJ2 495 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 SRGAP1Q7Z6B7 1085 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 ADAT2Q7Z6V5 191 aaKnown RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 CTAGE6Q86UF2 777 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 CTAGE4Q8IX94 777 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 RPUSD2Q8IZ73 545 aaKnown RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 FBXL13Q8NEE6 735 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 OR6J1Q8NGC5 347 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 BBXQ8WY36 941 aaPredicted RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 IQCDQ96DY2 449 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 NOX5Q96PH1 765 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TINF2Q9BSI4 451 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TIPINQ9BVW5 301 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 NUCKS1Q9H1E3 243 aaKnown RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 ST6GALNAC4Q9H4F1 302 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 SMARCAD1Q9H4L7 1026 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TUT1Q9H6E5 874 aaKnown RBP3.71□□□□□ -1.81
LIG4-205ENST00000614526 RAB20Q9NX57 234 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 FLRT1Q9NZU1 646 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 DOCK3Q8IZD9 2030 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 UMODL1Q5DID0 1318 aa3.71□□□□□ -1.81
LIG4-205ENST00000614526 TBC1D8O95759 1140 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 CST3P01034 146 aaPredicted RBP3.71□□□□□ -1.82
LIG4-205ENST00000614526 GH1P01241 217 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 MMEP08473 750 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 KRT19P08727 400 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 H2AFZP0C0S5 128 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 FERP16591 822 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 CD58P19256 250 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 PIK3CAP42336 1068 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 GCLCP48506 637 aaPredicted RBP3.71□□□□□ -1.82
LIG4-205ENST00000614526 ZNF200P98182 395 aaPredicted RBP3.71□□□□□ -1.82
LIG4-205ENST00000614526 AMPD2Q01433 879 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 ORC1Q13415 861 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 NFIL3Q16649 462 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 MAPK6Q16659 721 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 KIZQ2M2Z5 673 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 TDRD10Q5VZ19 366 aaKnown RBP3.71□□□□□ -1.82
LIG4-205ENST00000614526 LLGL2Q6P1M3 1020 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 MAMDC4Q6UXC1 1216 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 H2AFVQ71UI9 128 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 ANKRD23Q86SG2 305 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 VPS36Q86VN1 386 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 PASD1Q8IV76 773 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 TRIM58Q8NG06 486 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 NLRP7Q8WX94 980 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 ANKRD7Q92527 254 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 ARHGEF26Q96DR7 871 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 BTBD6Q96KE9 485 aa3.71□□□□□ -1.82
LIG4-205ENST00000614526 ALS2CR12Q96Q35 445 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms