RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 TMEM8AQ9HCN3 771 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 ZNF142P52746 1687 aaPredicted RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 HGSO14964 777 aaPredicted RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 VCAM1P19320 739 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 MAGEA9P43362 315 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 LMNB2Q03252 620 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 PSPC1Q8WXF1 523 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 DNAI2Q9GZS0 605 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TMEM117Q9H0C3 514 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 TBX20Q9UMR3 447 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 RASSF10A6NK89 507 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 ATMINO43313 823 aaPredicted RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 HSPA9P38646 679 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 GMPSP49915 693 aaPredicted RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 PPP3CAQ08209 521 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 MAPK7Q13164 816 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 SIAH1Q8IUQ4 282 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 KAT5Q92993 513 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 RPS6KC1Q96S38 1066 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 PSMD1Q99460 953 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 WNT8AQ9H1J5 351 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 RANBP17Q9H2T7 1088 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 DNAJC17Q9NVM6 304 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 DBR1Q9UK59 544 aaKnown RBP6.83□□□□□ -1.32
SNX13-213ENST00000611725 SPEF2Q9C093 1822 aa6.83□□□□□ -1.32
SNX13-213ENST00000611725 HSD17B3P37058 310 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 ACOT2P49753 483 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PPP2R2AP63151 447 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PRKCEQ02156 737 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 ADCY2Q08462 1091 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 LRIG3Q6UXM1 1119 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SLC13A5Q86YT5 568 aaPredicted RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 DHX37Q8IY37 1157 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 IQCKQ8N0W5 287 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SLC30A5Q8TAD4 765 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 MGARPQ8TDB4 240 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PARD3BQ8TEW8 1205 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 ARHGEF2Q92974 986 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 FAM167AQ96KS9 214 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 GINM1Q9NU53 330 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 RBAKQ9NYW8 714 aaPredicted RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 ANAPC5Q9UJX4 755 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 C19orf81C9J6K1 198 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 MDH1P40925 334 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 KCNJ1P48048 391 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PMS2P54278 862 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 MAPK6Q16659 721 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 HADHQ16836 314 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 CYFIP1Q7L576 1253 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 DEFB132Q7Z7B7 95 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 NT5DC3Q86UY8 548 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 VSIG1Q86XK7 387 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SAMD3Q8N6K7 520 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 TMC2Q8TDI7 906 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 RNF25Q96BH1 459 aaPredicted RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 TARS2Q9BW92 718 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 BCAS3Q9H6U6 928 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SLC38A10Q9HBR0 1119 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 IRS2Q9Y4H2 1338 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 FAM153BP0C7A2 387 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 RPS12P25398 132 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 CDR2Q01850 454 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 FAM153CQ494X1 144 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 C6orf118Q5T5N4 469 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 TSEN2Q8NCE0 465 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 CCDC197Q8NCU1 140 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 C1orf54Q8WWF1 131 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 TMEM143Q96AN5 459 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 ZNF302Q9NR11 478 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 MAP3K20Q9NYL2 800 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 FAM153AQ9UHL3 310 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 LRP6O75581 1613 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 TMEM150BA6NC51 233 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 LSP1P33241 339 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 STAT5BP51692 787 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 OSTNP61366 133 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 ADCY1Q08828 1119 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 TFDP1Q14186 410 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 CAPN12Q6ZSI9 719 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 VSIG10LQ86VR7 867 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 NLRP14Q86W24 1093 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SCYL3Q8IZE3 742 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 SPIRE2Q8WWL2 714 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 CCT8L2Q96SF2 557 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 EFCC1Q9HA90 598 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 KRT1P04264 644 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 BACE1P56817 501 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PCNX4Q63HM2 1172 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 NIPA1Q7RTP0 329 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 RHOT1Q8IXI2 618 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
SNX13-213ENST00000611725 PABPC3Q9H361 631 aaKnown RBP6.82□□□□□ -1.32
SNX13-213ENST00000611725 GMNCA6NCL1 334 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 LYPLA2O95372 231 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 SRGAP2CP0DJJ0 459 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ZNF131P52739 623 aa6.81□□□□□ -1.32
SNX13-213ENST00000611725 ITGB3BPQ13352 177 aaPredicted RBP6.81□□□□□ -1.32
SNX13-213ENST00000611725 EMC2Q15006 297 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms