RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 EXTL3O43909 919 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 TPM2P07951 284 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 HARSP12081 509 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 ZSCAN20P17040 1043 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CDK11BP21127 795 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 EEF1GP26641 437 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 ADSSP30520 456 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 PSMC2P35998 433 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 NFX1Q12986 1120 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 UVSSAQ2YD98 709 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CCDC40Q4G0X9 1142 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 FILIP1Q7Z7B0 1213 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 FAM186BQ8IYM0 893 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 APBB2Q92870 758 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 FTHL17Q9BXU8 183 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 IFIH1Q9BYX4 1025 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 PPP1R12CQ9BZL4 782 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 TRIM6Q9C030 488 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 CDT1Q9H211 546 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 METTL14Q9HCE5 456 aaKnown RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 PRDM5Q9NQX1 630 aaPredicted RBP12.87□□□□□ -0.35
DNMT1-211ENST00000586988 FANCLQ9NW38 375 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 PRKAG2Q9UGJ0 569 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 ST3GAL5Q9UNP4 418 aa12.87□□□□□ -0.35
DNMT1-211ENST00000586988 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 ABLIM1O14639 778 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 KIAA0355O15063 1070 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 KRT13P13646 458 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 ZNF18P17022 549 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 CD52P31358 61 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 RAB27AP51159 221 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 MARSP56192 900 aaKnown RBP12.86□□□□□ -0.35
DNMT1-211ENST00000586988 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 KCNJ12Q14500 433 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 SNRNP35Q16560 246 aaKnown RBP12.86□□□□□ -0.35
DNMT1-211ENST00000586988 TWF2Q6IBS0 349 aaKnown RBP12.86□□□□□ -0.35
DNMT1-211ENST00000586988 INTS8Q75QN2 995 aaKnown RBP12.86□□□□□ -0.35
DNMT1-211ENST00000586988 FRMD5Q7Z6J6 570 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 ZBTB33Q86T24 672 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 HACE1Q8IYU2 909 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 SEPT8Q92599 483 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 PCIF1Q9H4Z3 704 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 SAMSN1Q9NSI8 373 aaKnown RBP12.86□□□□□ -0.35
DNMT1-211ENST00000586988 USP20Q9Y2K6 914 aa12.86□□□□□ -0.35
DNMT1-211ENST00000586988 FSD2A1L4K1 749 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 CCDC85CA6NKD9 419 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 AKAP3O75969 853 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 TIMP1P01033 207 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 SKIP12755 728 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 RAG1P15918 1043 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 HOXA11P31270 313 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 MTIF2P46199 727 aaKnown RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 POU5F1Q01860 360 aaKnown RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 ENPEPQ07075 957 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 MBTPS1Q14703 1052 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 TCP11X2Q5H9J9 407 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 EEF1DP3Q658K8 133 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 EEF2KMTQ96G04 330 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 ZBTB45Q96K62 511 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 FAM213AQ9BRX8 229 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 CCDC94Q9BW85 323 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 WNT8AQ9H1J5 351 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-211ENST00000586988 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 RALGAPA2Q2PPJ7 1873 aa12.85□□□□□ -0.35
DNMT1-211ENST00000586988 NBNO60934 754 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 NPTXRO95502 500 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 SERPINC1P01008 464 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 CXCL10P02778 98 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 TPM3P06753 285 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 PFKMP08237 780 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 PRKCSHP14314 528 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-211ENST00000586988 CYP2C18P33260 490 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 GRM5P41594 1212 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 CCL23P55773 120 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 BFSP1Q12934 665 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 FILIP1LQ4L180 1135 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 CREBRFQ8IUR6 639 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 BRSK2Q8IWQ3 736 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 TMEM199Q8N511 208 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 TRAIPQ9BWF2 469 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 HAPLN2Q9GZV7 340 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 GRPEL1Q9HAV7 217 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 C1orf112Q9NSG2 853 aa12.84□□□□□ -0.35
DNMT1-211ENST00000586988 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-211ENST00000586988 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
DNMT1-211ENST00000586988 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms