RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CNGA2Q16280 664 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 WLSQ5T9L3 541 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 ZNF564Q8TBZ8 553 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-206ENST00000573852 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 HSPBP1Q9NZL4 362 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 PKD2L1Q9P0L9 805 aa20.48■□□□□ 0.87
SCARF1-206ENST00000573852 MGRN1O60291 552 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 GZMAP12544 262 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 CROCCP2Q86T23 111 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 MORC4Q8TE76 937 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 VTI1AQ96AJ9 217 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 MTUS1Q9ULD2 1270 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 ALDH1B1P30837 517 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 ELF3P78545 371 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-206ENST00000573852 FMO1Q01740 532 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 EXOC3L1Q86VI1 746 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 CEP57Q86XR8 500 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 DDX23Q9BUQ8 820 aaKnown RBP20.47■□□□□ 0.87
SCARF1-206ENST00000573852 TMEM206Q9H813 350 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 SLC12A4Q9UP95 1085 aa20.47■□□□□ 0.87
SCARF1-206ENST00000573852 PASKQ96RG2 1323 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 TP73O15350 636 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 RASA3Q14644 834 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 ZNF568Q3ZCX4 644 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 SAMD1Q6SPF0 538 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-206ENST00000573852 NSMFQ6X4W1 530 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 CYFIP1Q7L576 1253 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 CCDC50Q8IVM0 306 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 XXYLT1Q8NBI6 393 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 CSRNP1Q96S65 589 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 CXorf56Q9H5V9 222 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 SAMD15Q9P1V8 674 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 LARSQ9P2J5 1176 aaKnown RBP20.46■□□□□ 0.87
SCARF1-206ENST00000573852 ATRNL1Q5VV63 1379 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 GOLGB1Q14789 3259 aaKnown RBP20.46■□□□□ 0.87
SCARF1-206ENST00000573852 TULP1O00294 542 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-206ENST00000573852 CYP1A2P05177 515 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 IBSPP21815 317 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-206ENST00000573852 MXI1P50539 228 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 LONRF1Q17RB8 773 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 PPM1KQ8N3J5 372 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 SH2D3AQ9BRG2 576 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 TAOK3Q9H2K8 898 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 AAASQ9NRG9 546 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 MCM8Q9UJA3 840 aa20.46■□□□□ 0.87
SCARF1-206ENST00000573852 TRAF1Q13077 416 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 PPP1R7Q15435 360 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 MSL1Q68DK7 614 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 MFSD5Q6N075 450 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 HIBCHQ6NVY1 386 aaPredicted RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 RNF207Q6ZRF8 634 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 MIGA2Q7L4E1 593 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 SEMA4DQ92854 862 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 ZNF653Q96CK0 615 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 STMN4Q9H169 189 aaPredicted RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 SERPINA10Q9UK55 444 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 GOLGA8IPA6NC78 632 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 GOLGA8JA6NMD2 632 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 CLDN3O15551 220 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 ECE2O60344 883 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 ADRB2P07550 413 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 DLATP10515 647 aaKnown RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 MAP2K1Q02750 393 aaPredicted RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 C12orf56Q8IXR9 622 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 C12orf50Q8NA57 414 aaPredicted RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 MAGEC3Q8TD91 643 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 C1orf54Q8WWF1 131 aa20.45■□□□□ 0.86
SCARF1-206ENST00000573852 TMX4Q9H1E5 349 aaPredicted RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 RANBP17Q9H2T7 1088 aaKnown RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 CDC42EP4Q9H3Q1 356 aaKnown RBP20.45■□□□□ 0.86
SCARF1-206ENST00000573852 ECEL1O95672 775 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 CREB1P16220 341 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 ITGB5P18084 799 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 RWDD2BP57060 319 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 TBC1D10BQ4KMP7 808 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-206ENST00000573852 TRPM8Q7Z2W7 1104 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 MIER3Q7Z3K6 550 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 TMEM174Q8WUU8 243 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 MXRA8Q9BRK3 442 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 LRRC19Q9H756 370 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 EHMT1Q9H9B1 1298 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 ABCF3Q9NUQ8 709 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 LOXHD1Q8IVV2 1947 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 ACSL3O95573 720 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 LRRC14Q15048 493 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 FAM133BQ5BKY9 247 aaKnown RBP20.44■□□□□ 0.86
SCARF1-206ENST00000573852 TAOK1Q7L7X3 1001 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 OTUD6AQ7L8S5 288 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 PSPC1Q8WXF1 523 aaKnown RBP20.44■□□□□ 0.86
SCARF1-206ENST00000573852 GJD4Q96KN9 370 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-206ENST00000573852 RUNDC3BQ96NL0 473 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 TMX2Q9Y320 296 aa20.44■□□□□ 0.86
SCARF1-206ENST00000573852 MRPL11Q9Y3B7 192 aaKnown RBP20.44■□□□□ 0.86
SCARF1-206ENST00000573852 ENTPD3O75355 529 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 GSTA1P08263 222 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 FKBP1AP62942 108 aaKnown RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 CALCOCO2Q13137 446 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 SHC3Q92529 594 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms