RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 GPR37L1O60883 481 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 EFNA5P52803 228 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 KCNC3Q14003 757 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 GIT2Q14161 759 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 MAPK6Q16659 721 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 LONRF3Q496Y0 759 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMC7Q7Z402 723 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 MRPL43Q8N983 215 aaKnown RBP11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 BSNDQ8WZ55 320 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 IFT74Q96LB3 600 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 AK8Q96MA6 479 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 POP1Q99575 1024 aaKnown RBP11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 MMTAG2Q9BU76 263 aaKnown RBP11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 TIPINQ9BVW5 301 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 CCDC113Q9H0I3 377 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 DNAJB4Q9UDY4 337 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 PHLPP2Q6ZVD8 1323 aa11.5□□□□□ -0.57
PTCD2P1-201ENST00000554393 TRIP11Q15643 1979 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 C2orf71A6NGG8 1288 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ARL5CA6NH57 179 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 NT5C1B-RDH14C9J2C7 533 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ACKR2O00590 384 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 N4BP3O15049 544 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 DDHD2O94830 711 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ALDH2P05091 517 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 CTSAP10619 480 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 SLC11A1P49279 550 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 FOXK2Q01167 660 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZP2Q05996 745 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 DSC1Q08554 894 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 TMEM173Q86WV6 379 aaPredicted RBP11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZNF280BQ86YH2 543 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ADHFE1Q8IWW8 467 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 GJD3Q8N144 294 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 INTS4Q96HW7 963 aaKnown RBP11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 DRC1Q96MC2 740 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 FAM193BQ96PV7 902 aaPredicted RBP11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZBP1Q9H171 429 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 NXF3Q9H4D5 531 aaKnown RBP11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 C17orf75Q9HAS0 396 aa11.49□□□□□ -0.57
PTCD2P1-201ENST00000554393 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 CITO14578 2027 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 PP2D1A8MPX8 630 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 E9PMD0 336 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 PER2O15055 1255 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 B4GALT3O60512 393 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 NPTXRO95502 500 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 PRKCBP05771 671 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 HOXB8P17481 243 aaPredicted RBP11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 CDC25AP30304 524 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 MLH1P40692 756 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 AFF1P51825 1210 aaKnown RBP11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 CLUL1Q15846 466 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 COLGALT2Q8IYK4 626 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 VPS52Q8N1B4 723 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 VN1R2Q8NFZ6 395 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 BCL7CQ8WUZ0 217 aaPredicted RBP11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 GAD1Q99259 594 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 ADPGKQ9BRR6 497 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 CD320Q9NPF0 282 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 C11orf16Q9NQ32 467 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 KCND2Q9NZV8 630 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 BARX2Q9UMQ3 279 aaPredicted RBP11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 HES2Q9Y543 173 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 C5orf42Q9H799 3197 aa11.48□□□□□ -0.57
PTCD2P1-201ENST00000554393 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 FAM86C2PA6NEL3 165 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 NRP1O14786 923 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 NR1I2O75469 434 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 POMCP01189 267 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 NHLH1Q02575 133 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 GRIK3Q13003 919 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 E2F4Q16254 413 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 DCAF4L1Q3SXM0 396 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 RINT1Q6NUQ1 792 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 ANKRD54Q6NXT1 300 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 C1orf186Q6ZWK4 172 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 APBB1IPQ7Z5R6 666 aaPredicted RBP11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 DAW1Q8N136 415 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 GSTCDQ8NEC7 633 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 CASP10Q92851 521 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 VN1R3Q9BXE9 311 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 PDZD7Q9H5P4 517 aa11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
PTCD2P1-201ENST00000554393 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms