RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 MSH4O15457 936 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 MSH2P43246 934 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 GPC5P78333 572 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 CALCOCO2Q13137 446 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 SLC13A5Q86YT5 568 aaPredicted RBP19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 FAM20AQ96MK3 541 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 POP1Q99575 1024 aaKnown RBP19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 VAV3Q9UKW4 847 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 STK24Q9Y6E0 443 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 SLX4Q8IY92 1834 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 O00370 1275 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 EML1O00423 815 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 CDC25CP30307 473 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 SHMT1P34896 483 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 ZNF568Q3ZCX4 644 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 ZNF746Q6NUN9 644 aaPredicted RBP19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 CKAP2Q8WWK9 683 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 SERPINB12Q96P63 405 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 POLR3CQ9BUI4 534 aaPredicted RBP19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 RXFP1Q9HBX9 757 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 CTNNAL1Q9UBT7 734 aa19.54■□□□□ 0.72
PCDHB18P-201ENST00000524813 PPP1R12AO14974 1030 aaPredicted RBP19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 RRP1BQ14684 758 aaKnown RBP19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 ZKSCAN8Q15776 578 aaPredicted RBP19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 LRCH2Q5VUJ6 765 aa19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 ASRGL1Q7L266 308 aa19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 CPNE8Q86YQ8 564 aa19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 WNT8AQ9H1J5 351 aa19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 SLC5A4Q9NY91 659 aa19.53■□□□□ 0.72
PCDHB18P-201ENST00000524813 H0YIN7 160 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 GH1P01241 217 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 SIX1Q15475 284 aaPredicted RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 MIGA2Q7L4E1 593 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 HS2ST1Q7LGA3 356 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 RPUSD2Q8IZ73 545 aaKnown RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 SPDL1Q96EA4 605 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 UBE2TQ9NPD8 197 aaPredicted RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 AAASQ9NRG9 546 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 AGPAT3Q9NRZ7 376 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 PRKAG3Q9UGI9 489 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 BCS1LQ9Y276 419 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 HGSO14964 777 aaPredicted RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 ATMINO43313 823 aaPredicted RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 ECEL1O95672 775 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 ATP5DP30049 168 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 SNAP25P60880 206 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 TCEAL1Q15170 157 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 NAIF1Q69YI7 327 aaPredicted RBP19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 RDH13Q8NBN7 331 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 LMO3Q8TAP4 145 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 CYP2W1Q8TAV3 490 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 CD101Q93033 1021 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 RMDN2Q96LZ7 410 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 PLCD4Q9BRC7 762 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 DMAC2Q9NW81 257 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 ADAM22Q9P0K1 906 aa19.52■□□□□ 0.72
PCDHB18P-201ENST00000524813 BCRP11274 1271 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 CCNHP51946 323 aaPredicted RBP19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 LACTBP83111 547 aaPredicted RBP19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 SATB1Q01826 763 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 MPP2Q14168 576 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 RNF207Q6ZRF8 634 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 BTBD6Q96KE9 485 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 PARVGQ9HBI0 331 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 SLURP2P0DP57 97 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 CHKAP35790 457 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 C1orf186Q6ZWK4 172 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 CNKSR1Q969H4 720 aa19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 TGS1Q96RS0 853 aaKnown RBP19.51■□□□□ 0.71
PCDHB18P-201ENST00000524813 ZBTB39O15060 712 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 TP73O15350 636 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 SPOPO43791 374 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 BRAFP15056 766 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 ATP11AP98196 1134 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 BFSP1Q12934 665 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 LLGL1Q15334 1064 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 ZNF720Q7Z2F6 126 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 ARHGEF19Q8IW93 802 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 TPH2Q8IWU9 490 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 C10orf71Q711Q0 1435 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 FOCADQ5VW36 1801 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 DLATP10515 647 aaKnown RBP19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 ATP2A2P16615 1042 aaKnown RBP19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 RFX1P22670 979 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 SREBF1P36956 1147 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 MGAT5Q09328 741 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 CGB2Q6NT52 195 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 SLC30A10Q6XR72 485 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 C12orf50Q8NA57 414 aaPredicted RBP19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 FIZ1Q96SL8 496 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 PCDHB18PQ96TA0 734 aa19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 TMX4Q9H1E5 349 aaPredicted RBP19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 DNAJC17Q9NVM6 304 aaKnown RBP19.5■□□□□ 0.71
PCDHB18P-201ENST00000524813 EXOC3O60645 756 aa19.49■□□□□ 0.71
PCDHB18P-201ENST00000524813 STX2P32856 288 aa19.49■□□□□ 0.71
PCDHB18P-201ENST00000524813 GCKP35557 465 aa19.49■□□□□ 0.71
PCDHB18P-201ENST00000524813 KRT17Q04695 432 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms