RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 HSD17B3P37058 310 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 PEX19P40855 299 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 MXI1P50539 228 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 PGM5Q15124 567 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 PDCD2Q16342 344 aaPredicted RBP13.52□□□□□ -0.25
SDHA-216ENST00000514027 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 XKR9Q5GH70 373 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 ZNF513Q8N8E2 541 aaPredicted RBP13.52□□□□□ -0.25
SDHA-216ENST00000514027 ZBTB10Q96DT7 871 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 PAIP2Q9BPZ3 127 aaKnown RBP13.52□□□□□ -0.25
SDHA-216ENST00000514027 SLITRK6Q9H5Y7 841 aa13.52□□□□□ -0.25
SDHA-216ENST00000514027 UTP11Q9Y3A2 253 aaKnown RBP13.52□□□□□ -0.25
SDHA-216ENST00000514027 ASTN2O75129 1339 aaPredicted RBP13.52□□□□□ -0.25
SDHA-216ENST00000514027 ATMINO43313 823 aaPredicted RBP13.51□□□□□ -0.25
SDHA-216ENST00000514027 ATP9AO75110 1047 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 FTLP02792 175 aaPredicted RBP13.51□□□□□ -0.25
SDHA-216ENST00000514027 NR1D1P20393 614 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 GBP2P32456 591 aaPredicted RBP13.51□□□□□ -0.25
SDHA-216ENST00000514027 HPDP32754 393 aaPredicted RBP13.51□□□□□ -0.25
SDHA-216ENST00000514027 FLT3P36888 993 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 PPATQ06203 517 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 NIPA1Q7RTP0 329 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 FAM228AQ86W67 206 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 PARP9Q8IXQ6 854 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 AGBL3Q8NEM8 1001 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 PLEKHO2Q8TD55 490 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 LRRC45Q96CN5 670 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 SPDL1Q96EA4 605 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 SAAL1Q96ER3 474 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 RMDN3Q96TC7 470 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 DEFB129Q9H1M3 183 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 NR2E1Q9Y466 385 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 PHF20L1A8MW92 1017 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 ADRB2P07550 413 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 CXCL9Q07325 125 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
SDHA-216ENST00000514027 MTMR2Q13614 643 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 EPC2Q52LR7 807 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 TMCO4Q5TGY1 634 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 ARHGEF16Q5VV41 709 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 AADACL2Q6P093 401 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.25
SDHA-216ENST00000514027 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 SLC38A10Q9HBR0 1119 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 ACP6Q9NPH0 428 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 TBC1D22BQ9NU19 505 aa13.51□□□□□ -0.25
SDHA-216ENST00000514027 GOLGA6L10A0A0M3HER8 536 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 SGPL1O95470 568 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 MAPTP10636 758 aaKnown RBP13.5□□□□□ -0.25
SDHA-216ENST00000514027 RAB27AP51159 221 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 SKOR1P84550 965 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 GUCY1A3Q02108 690 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 UAP1Q16222 522 aaPredicted RBP13.5□□□□□ -0.25
SDHA-216ENST00000514027 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 CBWD2Q8IUF1 395 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 CD302Q8IX05 232 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 RHOT2Q8IXI1 618 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 LPAR1Q92633 364 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 HOMER3Q9NSC5 361 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
SDHA-216ENST00000514027 COQ9O75208 318 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 EGFRP00533 1210 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 MYZAPP0CAP1 466 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 VCAM1P19320 739 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 PSMC5P62195 406 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 GTF2BQ00403 316 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 CYB5D1Q6P9G0 228 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 KDM7AQ6ZMT4 941 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 MTMR14Q8NCE2 650 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 ALG3Q92685 438 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 ELMO3Q96BJ8 720 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 RSRC1Q96IZ7 334 aaKnown RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 CARD9Q9H257 536 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 ERVK-5Q9HDB9 667 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 A6NNZ2 444 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 WDR64B1ANS9 1081 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 HMGB1P1B2RPK0 211 aaPredicted RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 CYP26A1O43174 497 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 SORBS3O60504 671 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 CCNE2O96020 404 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 SLC8A1P32418 973 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 SOX10P56693 466 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 DR1Q01658 176 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 SP4Q02446 784 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 MESDQ14696 234 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 SNRNP35Q16560 246 aaKnown RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 TUBB8Q3ZCM7 444 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 EIF1ADQ8N9N8 165 aaKnown RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 SCLT1Q96NL6 688 aa13.49□□□□□ -0.25
SDHA-216ENST00000514027 NAP1L3Q99457 506 aaPredicted RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 POP1Q99575 1024 aaKnown RBP13.49□□□□□ -0.25
SDHA-216ENST00000514027 PDCD2LQ9BRP1 358 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms