RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MAF1Q9H063 256 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 TMEM206Q9H813 350 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SMARCAL1Q9NZC9 954 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 EHD2Q9NZN4 543 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 AJAP1Q9UKB5 411 aaPredicted RBP11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 SYNGAP1Q96PV0 1343 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 IGSF9BQ9UPX0 1349 aa11.91□□□□□ -0.5
SH3RF1-203ENST00000508685 ARID2Q68CP9 1835 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 KCNK3O14649 394 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 CYP2C8P10632 490 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 ATP4AP20648 1035 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 NOP2P46087 812 aaKnown RBP11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 DLG4P78352 724 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 BIRC3Q13489 604 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 SPDYCQ5MJ68 293 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 WDR78Q5VTH9 848 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 MIS18BP1Q6P0N0 1132 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 GJB7Q6PEY0 223 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 SLC9A9Q8IVB4 645 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 LRRC57Q8N9N7 239 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 TMEM161BQ8NDZ6 487 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 ACCSQ96QU6 501 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 EPN3Q9H201 632 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 SIX2Q9NPC8 291 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 XPNPEP1Q9NQW7 623 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 CYP26B1Q9NR63 512 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 TTC7AQ9ULT0 858 aaPredicted RBP11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 FAM169AQ9Y6X4 670 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 ADGRA3Q8IWK6 1321 aa11.9□□□□□ -0.5
SH3RF1-203ENST00000508685 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.51
SH3RF1-203ENST00000508685 ZNF233A6NK53 670 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 BHMG1C9JSJ3 638 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 TULP1O00294 542 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 NDUFAB1O14561 156 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 STAT1P42224 750 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 FMO5P49326 533 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 BFSP1Q12934 665 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 DMP1Q13316 513 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ALCAMQ13740 583 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 MTERF2Q49AM1 385 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 LDLRAD1Q5T700 205 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ZNF571Q7Z3V5 609 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 RASGEF1CQ8N431 466 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 VTI1AQ96AJ9 217 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ZBTB9Q96C00 473 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 FGD4Q96M96 766 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ST6GALNAC4Q9H4F1 302 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 CREBZFQ9NS37 354 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 DENND3A2RUS2 1198 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 RAD51CO43502 376 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 DGAT1O75907 488 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 KIAA0754O94854 1291 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 FARP2O94887 1054 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 NR1D1P20393 614 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 USP8P40818 1118 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 JAM2P57087 298 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 HTRA3P83110 453 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 FASTKD5Q7L8L6 764 aaKnown RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 PEX26Q7Z412 305 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 NAP1L3Q99457 506 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 HINFPQ9BQA5 517 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ZNF302Q9NR11 478 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM114A2Q9NRY5 505 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 TBX20Q9UMR3 447 aa11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 MAFBQ9Y5Q3 323 aaPredicted RBP11.89□□□□□ -0.51
SH3RF1-203ENST00000508685 ANKRD63C9JTQ0 380 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 CEP104O60308 925 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 DKC1O60832 514 aaKnown RBP eCLIP11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 ERLIN2O94905 339 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 ATG7O95352 703 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 ARIH2O95376 493 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 SLC25A27O95847 323 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM153BP0C7A2 387 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 MYZAPP0CAP1 466 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 ADSSP30520 456 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 SMTNP53814 917 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM153CQ494X1 144 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 XKR3Q5GH77 459 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 PIK3R5Q8WYR1 880 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 KIFAP3Q92845 792 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 PACSIN1Q9BY11 444 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 PORCNQ9H237 461 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 TMBIM4Q9HC24 238 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 FAM153AQ9UHL3 310 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 STXBP5LQ9Y2K9 1186 aa11.88□□□□□ -0.51
SH3RF1-203ENST00000508685 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
SH3RF1-203ENST00000508685 GOLGA8JA6NMD2 632 aa11.87□□□□□ -0.51
SH3RF1-203ENST00000508685 KRT14P02533 472 aa11.87□□□□□ -0.51
SH3RF1-203ENST00000508685 OATP04181 439 aa11.87□□□□□ -0.51
SH3RF1-203ENST00000508685 OSBPP22059 807 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms