RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ARHGAP44Q17R89 818 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 LNX1Q8TBB1 728 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 PSPC1Q8WXF1 523 aaKnown RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 ISCUQ9H1K1 167 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 TBXAS1P24557 533 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 GCLCP48506 637 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 VSNL1P62760 191 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 TTLL4Q14679 1199 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 EMBQ6PCB8 327 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 GJB7Q6PEY0 223 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 IFT20Q8IY31 132 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 ATP8B4Q8TF62 1192 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 OPTNQ96CV9 577 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 LCMT1Q9UIC8 334 aa12.23□□□□□ -0.45
NFKB1-205ENST00000505458 AJAP1Q9UKB5 411 aaPredicted RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
NFKB1-205ENST00000505458 TMEM150BA6NC51 233 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 PGRMC1O00264 195 aaKnown RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 ADCY3O60266 1144 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 CBX1P83916 185 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 SP4Q02446 784 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 HSP90B2PQ58FF3 399 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 ZNF467Q7Z7K2 595 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 GLYCTKQ8IVS8 523 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 SMARCAD1Q9H4L7 1026 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 STIM2Q9P246 746 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 GLTPD2A6NH11 291 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 GLRA2P23416 452 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 DLG4P78352 724 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 TRIM72Q6ZMU5 477 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 COG1Q8WTW3 980 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 SCFD2Q8WU76 684 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 PACSIN1Q9BY11 444 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 MRPL4Q9BYD3 311 aaKnown RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 UBXN6Q9BZV1 441 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 IKZF4Q9H2S9 585 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 MYBL1P10243 752 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 CETPP11597 493 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 TCF7P36402 384 aaPredicted RBP12.22□□□□□ -0.45
NFKB1-205ENST00000505458 SP2Q02086 613 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 SLC39A4Q6P5W5 647 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 ABCB6Q9NP58 842 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
NFKB1-205ENST00000505458 LRRIQ4A6NIV6 560 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 HBP1O60381 514 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 GRIN3BO60391 1043 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 EPHB4P54760 987 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 GPC5P78333 572 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 IRF5Q13568 498 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 CDCA2Q69YH5 1023 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-205ENST00000505458 C15orf39Q6ZRI6 1047 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 PPM1KQ8N3J5 372 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 SAAL1Q96ER3 474 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 CGRRF1Q99675 332 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 CARD9Q9H257 536 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 COL1A2P08123 1366 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 ADGRA3Q8IWK6 1321 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 PDE2AO00408 941 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-205ENST00000505458 ERVK-9P63128 1117 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
NFKB1-205ENST00000505458 POU5F1BQ06416 359 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 KYAT1Q16773 422 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 DAAM2Q86T65 1068 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 ARHGEF19Q8IW93 802 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 USP38Q8NB14 1042 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 FAXDC2Q96IV6 333 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 RPS6KC1Q96S38 1066 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 IMPG2Q9BZV3 1241 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 SLITRK6Q9H5Y7 841 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 RBPJLQ9UBG7 517 aa12.21□□□□□ -0.45
NFKB1-205ENST00000505458 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 ZNF185O15231 689 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 STRNO43815 780 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 FTCDO95954 541 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 ATP4AP20648 1035 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 CDR2Q01850 454 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 ZACNQ401N2 412 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.46
NFKB1-205ENST00000505458 DHX37Q8IY37 1157 aaKnown RBP12.21□□□□□ -0.46
NFKB1-205ENST00000505458 RASGEF1CQ8N431 466 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 UBL4BQ8N7F7 174 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 EPS8L1Q8TE68 723 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 CCDC127Q96BQ5 260 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.21□□□□□ -0.464e-6■■□□□ 11.8
NFKB1-205ENST00000505458 SEPT11Q9NVA2 429 aaKnown RBP12.21□□□□□ -0.46
NFKB1-205ENST00000505458 GTF3C4Q9UKN8 822 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 STXBP5LQ9Y2K9 1186 aa12.21□□□□□ -0.46
NFKB1-205ENST00000505458 GOLGA6L10A0A0M3HER8 536 aa12.2□□□□□ -0.46
NFKB1-205ENST00000505458 TISP43B9A030 160 aa12.2□□□□□ -0.46
NFKB1-205ENST00000505458 GTF2A2P52657 109 aa12.2□□□□□ -0.46
NFKB1-205ENST00000505458 C2orf54Q08AI8 447 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms