RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 REXO1Q8N1G1 1221 aaKnown RBP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 LRRN4CLQ8ND94 238 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 MED15Q96RN5 788 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 VPS16Q9H269 839 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.86□□□□□ -0.83
COL12A1-208ENST00000486533 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
COL12A1-208ENST00000486533 NFASCO94856 1347 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 COL4A4P53420 1690 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 ESYT2A0FGR8 921 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 MEIS1O00470 390 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 PES1O00541 588 aaKnown RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 DPYSL4O14531 572 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 UPP2O95045 317 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 ZBED6P86452 979 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 ITGB3BPQ13352 177 aaPredicted RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 SPA17Q15506 151 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 EARS2Q5JPH6 523 aaKnown RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 FAM71BQ8TC56 605 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 APBB2Q92870 758 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 IFIH1Q9BYX4 1025 aaKnown RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 OSBPL7Q9BZF2 842 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 ZMYND12Q9H0C1 365 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 NUCKS1Q9H1E3 243 aaKnown RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 BLZF1Q9H2G9 400 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 AGO4Q9HCK5 861 aaKnown RBP9.85□□□□□ -0.83
COL12A1-208ENST00000486533 KBTBD4Q9NVX7 518 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 MTCH2Q9Y6C9 303 aa9.85□□□□□ -0.83
COL12A1-208ENST00000486533 EIF3CLB5ME19 914 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 FAM86B1E9PN63 330 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MAP2K7O14733 419 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 BACH1O14867 736 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 CHRNA1P02708 482 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 FAM86B2P0C5J1 330 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 GHRP10912 638 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 INSRRP14616 1297 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 TRIM21P19474 475 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PRCPP42785 496 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MTIF2P46199 727 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 STAT5BP51692 787 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 GRB10Q13322 594 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MTF1Q14872 753 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 FAM26DQ5JW98 314 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 CABP7Q86V35 215 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 CSGALNACT2Q8N6G5 542 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 C4orf32Q8N8J7 132 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 GDPD5Q8WTR4 605 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 DNAJB3Q8WWF6 145 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 ATXN2LQ8WWM7 1075 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 P2RX5Q93086 422 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 JAKMIP2Q96AA8 810 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 ZBTB10Q96DT7 871 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 CDK5RAP3Q96JB5 506 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 ALS2CR12Q96Q35 445 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 UIMC1Q96RL1 719 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 TGS1Q96RS0 853 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PCYT2Q99447 389 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 EIF3CQ99613 913 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 TSG101Q99816 390 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 C7orf25Q9BPX7 421 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 FUT8Q9BYC5 575 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 EDEM3Q9BZQ6 932 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 FAM49AQ9H0Q0 323 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 INSL6Q9Y581 213 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 SIP14410 1827 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 NCOR1O75376 2440 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MBLAC1A4D2B0 266 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 LINC01553A4QN01 128 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 RRN3P2A6NIE6 340 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 IPO5O00410 1097 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MRPS5P82675 430 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 KIF5AQ12840 1032 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PSMD2Q13200 908 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PLCB4Q15147 1175 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MEA1Q16626 185 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MARCH8Q5T0T0 291 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 CCDC122Q5T0U0 273 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 MCTP2Q6DN12 878 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 NIPA1Q7RTP0 329 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PLPPR4Q7Z2D5 763 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 NEK8Q86SG6 692 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 RPAINQ86UA6 219 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 SMYD4Q8IYR2 804 aaPredicted RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 GOLGA5Q8TBA6 731 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 RASGRP4Q8TDF6 673 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 TRAPPC12Q8WVT3 735 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 ASB2Q96Q27 587 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 YME1L1Q96TA2 773 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 ZNF577Q9BSK1 485 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 TCEAL9Q9UHQ7 104 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 PUF60Q9UHX1 559 aaKnown RBP9.84□□□□□ -0.83
COL12A1-208ENST00000486533 SAR1BQ9Y6B6 198 aa9.84□□□□□ -0.83
COL12A1-208ENST00000486533 BDP1A6H8Y1 2624 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 PVALEFA0A1B0GWK0 134 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 M0QZ92 97 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ADAMTS3O15072 1205 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 FANCGO15287 622 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 POLR3GO15318 223 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms