RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ARHGAP28Q9P2N2 729 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 MYO1AQ9UBC5 1043 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TRIM10Q9UDY6 481 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 AGO2Q9UKV8 859 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 MYO6Q9UM54 1294 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 TFR2Q9UP52 801 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 AKT3Q9Y243 479 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 USP20Q9Y2K6 914 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 REXO2Q9Y3B8 237 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 DAAM1Q9Y4D1 1078 aa7.37□□□□□ -1.23
MSH2-204ENST00000461394 BZW2Q9Y6E2 419 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 GOLGB1Q14789 3259 aaKnown RBP7.37□□□□□ -1.23
MSH2-204ENST00000461394 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 LRRIQ3A6PVS8 624 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 INO80B-WBP1J3KQ70 363 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TNPO2O14787 897 aaKnown RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 KIAA0391O15091 583 aaKnown RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 P4HA2O15460 535 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ADCY3O60266 1144 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 LRRN2O75325 713 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 SNAI1O95863 264 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 SLC10A3P09131 477 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 INSRRP14616 1297 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 SMPD1P17405 629 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TNFAIP3P21580 790 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 RFX1P22670 979 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TMOD1P28289 359 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ADSSP30520 456 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 SOX5P35711 763 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 RGS2P41220 211 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ARHGAP25P42331 645 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 PIK3CAP42336 1068 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 PHKA2P46019 1235 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ACOT2P49753 483 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 CLCN3P51790 818 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 EFNA5P52803 228 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 INHBEP58166 350 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TNFAIP2Q03169 654 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 CYP24A1Q07973 514 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 PPP3CAQ08209 521 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 DRP2Q13474 957 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 BIRC3Q13489 604 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 DRAP1Q14919 205 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 MAPK6Q16659 721 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 DGKDQ16760 1214 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 WDR44Q5JSH3 913 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 PPP2R2DQ66LE6 453 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 KRT39Q6A163 491 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 IQSEC1Q6DN90 963 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 SLC39A4Q6P5W5 647 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 MAMDC4Q6UXC1 1216 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 PPTC7Q8NI37 304 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 CAGE1Q8TC20 777 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 U2AF1L4Q8WU68 220 aaKnown RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 VTI1AQ96AJ9 217 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ERO1AQ96HE7 468 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 NT5C1BQ96P26 610 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 MAP7D2Q96T17 732 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 CARD6Q9BX69 1037 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 STK33Q9BYT3 514 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 INO80BQ9C086 356 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 AP5M1Q9H0R1 490 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TMEM134Q9H6X4 195 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 TMEM8AQ9HCN3 771 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 ZCCHC17Q9NP64 241 aaKnown RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 SIX2Q9NPC8 291 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 NPDC1Q9NQX5 325 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 RBAKQ9NYW8 714 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 AIPL1Q9NZN9 384 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.36□□□□□ -1.23
MSH2-204ENST00000461394 AJAP1Q9UKB5 411 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
MSH2-204ENST00000461394 V9GYY5 206 aaPredicted RBP7.36□□□□□ -1.23
MSH2-204ENST00000461394 RBM47A0AV96 593 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 F8VZ95 297 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 MAGEB2O15479 319 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 CLDN3O15551 220 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ASAP2O43150 1006 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 MAP3K7O43318 606 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 TLR2O60603 784 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 MOCS3O95396 460 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 ABL1P00519 1130 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 MMP3P08254 477 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 MYL3P08590 195 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PNMA6AP0CW24 399 aaPredicted RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 KLRC1P26715 233 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 NOP2P46087 812 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 MFAP3P55082 362 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 RBM10P98175 930 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 PPFIA1Q13136 1202 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PRPF4BQ13523 1007 aaKnown RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 SLC18A3Q16572 532 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 DUSP28Q4G0W2 176 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 EPC2Q52LR7 807 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 PRAMEF19Q5SWL8 479 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 HGSNATQ68CP4 663 aa7.35□□□□□ -1.23
MSH2-204ENST00000461394 LMBRD2Q68DH5 695 aaPredicted RBP7.35□□□□□ -1.23
MSH2-204ENST00000461394 TAS1R3Q7RTX0 852 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms