RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 ST6GALNAC4Q9H4F1 302 aa17.22■□□□□ 0.35
VCX3B-204ENST00000453306 TMEM134Q9H6X4 195 aa17.22■□□□□ 0.35
VCX3B-204ENST00000453306 SLC39A2Q9NP94 309 aa17.22■□□□□ 0.35
VCX3B-204ENST00000453306 OLFML3Q9NRN5 406 aa17.22■□□□□ 0.35
VCX3B-204ENST00000453306 LARSQ9P2J5 1176 aaKnown RBP17.22■□□□□ 0.35
VCX3B-204ENST00000453306 MAN1B1Q9UKM7 699 aa17.22■□□□□ 0.35
VCX3B-204ENST00000453306 TISP43B9A030 160 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 H3BQ06 376 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 RPS6KA5O75582 802 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 RHOBTB3O94955 611 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 GTF2BQ00403 316 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 BTG3Q14201 252 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 FAM26FQ5R3K3 315 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 EEF1DP3Q658K8 133 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 CDR2LQ86X02 465 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 SCFD1Q8WVM8 642 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 CLP1Q92989 425 aaKnown RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 PLVAPQ9BX97 442 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 INO80BQ9C086 356 aaPredicted RBP17.21■□□□□ 0.35
VCX3B-204ENST00000453306 CD320Q9NPF0 282 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 CLDND1Q9NY35 253 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 PRKAG3Q9UGI9 489 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 GDAQ9Y2T3 454 aa17.21■□□□□ 0.35
VCX3B-204ENST00000453306 ABLIM1O14639 778 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 PRKCBP05771 671 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 ARF4P18085 180 aaPredicted RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 NFX1Q12986 1120 aaKnown RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 KCNB1Q14721 858 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 COL19A1Q14993 1142 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 FAM187BQ17R55 369 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 UBXN11Q5T124 520 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 SLC39A4Q6P5W5 647 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 PPP4R3CPQ6ZMV5 832 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 RBM43Q6ZSC3 357 aaKnown RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 SMYD4Q8IYR2 804 aaPredicted RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 PPP2R3CQ969Q6 453 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 CPB2Q96IY4 423 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 ZBTB45Q96K62 511 aaPredicted RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 TARS2Q9BW92 718 aaKnown RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 HAPLN2Q9GZV7 340 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 MRPL44Q9H9J2 332 aaKnown RBP17.2■□□□□ 0.34
VCX3B-204ENST00000453306 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 TBX20Q9UMR3 447 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 RALGAPA2Q2PPJ7 1873 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
VCX3B-204ENST00000453306 PRR33A8MZF0 331 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 ANKRD63C9JTQ0 380 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 K7ENM7 598 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 K7ERI5 159 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 BIN1O00499 593 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 ACKR2O00590 384 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 DGKIO75912 1065 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 MBD3O95983 291 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 STAG3L1P0CL83 205 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-204ENST00000453306 EFNA5P52803 228 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 CATSPER4Q7RTX7 472 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 ZNF689Q96CS4 500 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-204ENST00000453306 NUP62CLQ9H1M0 184 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 C2orf40Q9H1Z8 148 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 PTPRHQ9HD43 1115 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 AGPAT5Q9NUQ2 364 aa17.19■□□□□ 0.34
VCX3B-204ENST00000453306 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
VCX3B-204ENST00000453306 FAM86C2PA6NEL3 165 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 GPR182O15218 404 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 GCNT3O95395 438 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 CD44P16070 742 aaKnown RBP17.18■□□□□ 0.34
VCX3B-204ENST00000453306 SMTNP53814 917 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 PAK2Q13177 524 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 MORC3Q14149 939 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 MAPK6Q16659 721 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 ZBTB8OSQ8IWT0 167 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 CMTR2Q8IYT2 770 aaKnown RBP17.18■□□□□ 0.34
VCX3B-204ENST00000453306 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 P2RX5Q93086 422 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 SMARCE1Q969G3 411 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 GSDMAQ96QA5 445 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 ACO2Q99798 780 aaKnown RBP17.18■□□□□ 0.34
VCX3B-204ENST00000453306 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
VCX3B-204ENST00000453306 EXOC1Q9NV70 894 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
VCX3B-204ENST00000453306 ZMYM2Q9UBW7 1377 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 A0A1B0GUA9 196 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 GRM6O15303 877 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 TGFB1I1O43294 461 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 KLHL40Q2TBA0 621 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 NLRC5Q86WI3 1866 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 MAP4K3Q8IVH8 894 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 ADHFE1Q8IWW8 467 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 CRIPAKQ8N1N5 446 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 POP1Q99575 1024 aaKnown RBP17.17■□□□□ 0.34
VCX3B-204ENST00000453306 ADAM2Q99965 735 aa17.17■□□□□ 0.34
VCX3B-204ENST00000453306 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms