RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 MEFVO15553 781 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 NCK2O43639 380 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 POMCP01189 267 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 MLH1P40692 756 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 ALDH7A1P49419 539 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 CACNB1Q02641 598 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 LEXMQ3ZCV2 418 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 XKR4Q5GH76 650 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 ATF7IP2Q5U623 682 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 ALKAL1Q6UXT8 129 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 DDX53Q86TM3 631 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 RNF168Q8IYW5 571 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 DNAJC19Q96DA6 116 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 TMEM175Q9BSA9 504 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 TARS2Q9BW92 718 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 RCOR1Q9UKL0 485 aa17.73■□□□□ 0.43
SCAMP4-205ENST00000452128 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 PLXNA4Q9HCM2 1894 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 CARNS1A5YM72 827 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 PTGESO14684 152 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 LILRB3O75022 631 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 SCNN1GP51170 649 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 KCNQ1P51787 676 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 SKIV2LQ15477 1246 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 E2F4Q16254 413 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 SHC4Q6S5L8 630 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 MRPL43Q8N983 215 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 URGCPQ8TCY9 931 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 STRA6Q9BX79 667 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 CDT1Q9H211 546 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 MARCH5Q9NX47 278 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 SNTG2Q9NY99 539 aa17.72■□□□□ 0.43
SCAMP4-205ENST00000452128 MYMKA6NI61 221 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 HIDE1A8MVS5 230 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 NRP1O14786 923 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 LINC01565O15544 149 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 ZC3H11AO75152 810 aaKnown RBP eCLIP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 GLP2RO95838 553 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 ALDH2P05091 517 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 HSP90AA1P07900 732 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 KRT17Q04695 432 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 STK38Q15208 465 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 RRAGBQ5VZM2 374 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 ZBTB45Q96K62 511 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 APOL6Q9BWW8 343 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 MRPL4Q9BYD3 311 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 TRIM6Q9C030 488 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 HAPLN2Q9GZV7 340 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 NGRNQ9NPE2 291 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 KLK14Q9P0G3 267 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 CLEC1BQ9P126 229 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 LARSQ9P2J5 1176 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 IRAK3Q9Y616 596 aa17.71■□□□□ 0.43
SCAMP4-205ENST00000452128 BDP1A6H8Y1 2624 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 CUTAO60888 179 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 RECQL4O94761 1208 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 PIGRP01833 764 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 LIG1P18858 919 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 DNM1Q05193 864 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 RNASELQ05823 741 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 DUSP6Q16828 381 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 DCAF4L1Q3SXM0 396 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 TMEM184AQ6ZMB5 413 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 HAUS6Q7Z4H7 955 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 MSLNLQ96KJ4 702 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 PANK2Q9BZ23 570 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 ST6GALNAC4Q9H4F1 302 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 PARVGQ9HBI0 331 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 PCDHA7Q9UN72 937 aa17.7■□□□□ 0.42
SCAMP4-205ENST00000452128 FRMD3A2A2Y4 597 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 C2orf71A6NGG8 1288 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 F8W810 466 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 TBX10O75333 385 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 SCP2P22307 547 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 KCNA5P22460 613 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 GRM5P41594 1212 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 SMTNP53814 917 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 GTF2BQ00403 316 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 AAK1Q2M2I8 961 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 HACE1Q8IYU2 909 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 CEP120Q8N960 986 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 DDX12PQ92771 950 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 CHAMP1Q96JM3 812 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 TCF25Q9BQ70 676 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 GBP3Q9H0R5 595 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 KBTBD4Q9NVX7 518 aa17.69■□□□□ 0.42
SCAMP4-205ENST00000452128 PARP2Q9UGN5 583 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms