RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
MSH5-208ENST00000429846 LIMD1Q9UGP4 676 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 A0A1B0GUA9 196 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 WNT7AO00755 349 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 C2CD2LO14523 706 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 JAK2O60674 1132 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 GLUD1P00367 558 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
MSH5-208ENST00000429846 ASGR2P07307 311 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 ERICH6BQ5W0A0 696 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 CDCA2Q69YH5 1023 aaPredicted RBP16.51■□□□□ 0.23
MSH5-208ENST00000429846 PPP4R3CPQ6ZMV5 832 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 PIGOQ8TEQ8 1089 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 HDAC7Q8WUI4 952 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 ZFP42Q96MM3 310 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 RXFP1Q9HBX9 757 aa16.51■□□□□ 0.23
MSH5-208ENST00000429846 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.51■□□□□ 0.23
MSH5-208ENST00000429846 LRRIQ4A6NIV6 560 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 TEX28O15482 410 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 B4GALT5O43286 388 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 SPATA31C1P0DKV0 1188 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 CREMQ03060 361 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 ZBTB8OSQ8IWT0 167 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 GSTCDQ8NEC7 633 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 ERMNQ8TAM6 284 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 STAMQ92783 540 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 POLR3CQ9BUI4 534 aaPredicted RBP16.5■□□□□ 0.23
MSH5-208ENST00000429846 APOL6Q9BWW8 343 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 CHST7Q9NS84 486 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 MIOSQ9NXC5 875 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 ADAM28Q9UKQ2 775 aa16.5■□□□□ 0.23
MSH5-208ENST00000429846 GALR2O43603 387 aaPredicted RBP16.49■□□□□ 0.23
MSH5-208ENST00000429846 PAPLNO95428 1278 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 NPTXRO95502 500 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 MCM7P33993 719 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 FOSBP53539 338 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 FAM187BQ17R55 369 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 USP41Q3LFD5 358 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 FUT10Q6P4F1 479 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 NACC1Q96RE7 527 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 PHOX2BQ99453 314 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 C2orf40Q9H1Z8 148 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 TMEM60Q9H2L4 133 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 MFSD1Q9H3U5 465 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 PLEKHA4Q9H4M7 779 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 FNIP2Q9P278 1114 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 IGSF9Q9P2J2 1179 aa16.49■□□□□ 0.23
MSH5-208ENST00000429846 ATP2B1P20020 1258 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 MUTP22033 750 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 AKAP5P24588 427 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 RPA1P27694 616 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 ST3GAL1Q11201 340 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 TDGQ13569 410 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 HAUS3Q68CZ6 603 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 ASTLQ6HA08 431 aaPredicted RBP16.48■□□□□ 0.23
MSH5-208ENST00000429846 TAS1R1Q7RTX1 841 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 FEZF2Q8TBJ5 459 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 C8orf76Q96K31 380 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 LLPHQ9BRT6 129 aaKnown RBP16.48■□□□□ 0.23
MSH5-208ENST00000429846 SMOC2Q9H3U7 446 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 FZD8Q9H461 694 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
MSH5-208ENST00000429846 GPRC5CQ9NQ84 441 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 PARP2Q9UGN5 583 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 DUSP12Q9UNI6 340 aa16.48■□□□□ 0.23
MSH5-208ENST00000429846 CLUHO75153 1309 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 SF3B1O75533 1304 aaKnown RBP eCLIP16.47■□□□□ 0.23
MSH5-208ENST00000429846 CCDC195A0A1B0GUA6 201 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 N4BP3O15049 544 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 MED24O75448 989 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 OR52Z1P0C646 297 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 CLCN5P51795 746 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 PPP2R5AQ15172 486 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 CDR2LQ86X02 465 aaPredicted RBP16.47■□□□□ 0.23
MSH5-208ENST00000429846 ATOH1Q92858 354 aaPredicted RBP16.47■□□□□ 0.23
MSH5-208ENST00000429846 ADPGKQ9BRR6 497 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
MSH5-208ENST00000429846 KCNK12Q9HB15 430 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 ZDHHC7Q9NXF8 308 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 DOCK8Q8NF50 2099 aa16.47■□□□□ 0.23
MSH5-208ENST00000429846 F8W810 466 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 ST18O60284 1047 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 NAMPTP43490 491 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
MSH5-208ENST00000429846 TUSC3Q13454 348 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 HSP90AA2PQ14568 343 aaPredicted RBP16.46■□□□□ 0.23
MSH5-208ENST00000429846 MAPK6Q16659 721 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 POTEGQ6S5H5 508 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 MAEAQ7L5Y9 396 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 TMEM105Q8N8V8 129 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 SMG7Q92540 1137 aaKnown RBP16.46■□□□□ 0.23
MSH5-208ENST00000429846 GPR62Q9BZJ7 368 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 EPS15L1Q9UBC2 864 aa16.46■□□□□ 0.23
MSH5-208ENST00000429846 ARHGEF35A5YM69 484 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 PROB1E7EW31 1015 aa16.45■□□□□ 0.22
MSH5-208ENST00000429846 TGM5O43548 720 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms